Job Description P45548 Confidence 98.90% Date Thu Jan 5 12:03:05 GMT 2012 Rank 93 Aligned Residues 268 % Identity 15% Template d1ra0a2 SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases Cytosine deaminase catalytic domain Resolution 1.12

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.																				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Query Sequence		Y	T	L	A	H	E	H	L	H	I	D	L	S	G	F	K	N	N	V	D	C	R	L	D	Q	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	I	C	Q	E	M	N	D	L	M	T	R	G	V	R	N	V	I	E	M	T	N	R	Y	M	G	R	N	.	.	A	Q	F	M
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Conservation
Template Sequence		F	V	E	P	H	I	H	L	D	T	T	Q	T	A	G	Q	P	N	W	N	Q	S	G	T	L	F	E	G	I	E	R	W	A	E	R	K	A	L	L	T	H	D	D	V	K	Q	R	A	W	Q	T	L	K	W	Q	I	A	N	G	I	Q	H	V	R	T	H	V	D	V	S	D	A	T	L	T	A	L	K	A	M
Template Known Secondary structure									T	T	T	T	T		T	T	S	S	S			S	S															T	T																				T	T												S	T	T
Template Predicted Secondary structure
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	V	M	R	E	T	G	I	N	V	V	A	C	T	G	Y	Y	Q	D	A	F	F	P	E	H	V	A	T	R	S	V	Q	E	L	A	Q	E	M	V	D	E	I	E	Q	G	I	D	G	T	E	L	K	A	G	I	I	A	E	I	G	T	S	E	G	K	I	T	P	L	E	E	K	V	F	I	A	A	A	L
Query Conservation
Alig confidence																						.	.	.	.	.	.																																			.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.																																			.	.	.	.	.	.	.	.
Template Sequence		L	E	V	K	Q	E	V	A	P	W	I	D	L	Q	I	V	A	F	P	Q	.	.	.	.	.	.	E	G	I	L	S	Y	P	N	G	E	A	L	L	E	E	A	L	R	L	G	A	D	V	V	G	A	I	P	H	F	E	F	T	R	.	.	.	.	.	.	.	.	E	Y	G	V	E	S	L	H	K	T	F	A
Template Known Secondary structure									T	T	T										T	.	.	.	.	.	.	T		S	S	S	S	T	T											T	T		S						G	G	G	S	S	S		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.	.																																			.	.	.	.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.							.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190									.	.	.	.	.	.	.	.	.	200	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.					.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.							.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.							210
Predicted Secondary structure																		.	.	.	.																									.	.	.	.	.	.																								.	.	.	.	.	.
Query SS confidence																		.	.	.	.																									.	.	.	.	.	.																								.	.	.	.	.	.
Query Sequence		A	H	N	Q	T	G	R	P	I	S	T	H	T	S	F	S	.	.	.	.	T	M	G	L	E	Q	L	A	L	L	Q	A	H	G	V	D	L	S	R	V	T	V	G	H	.	.	.	.	.	.	C	D	L	K	D	N	L	D	N	I	L	K	M	I	D	L	G	A	Y	V	Q	F	D	.	.	.	.	.	.	T
Query Conservation																		.	.	.	.																									.	.	.	.	.	.																								.	.	.	.	.	.
Alig confidence																		.	.	.	.																									.	.	.	.	.	.																								.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	Q	K	Y	D	R	L	I	D	V	H	C	D	E	I	D	D	E	Q	S	R	F	V	E	T	V	A	A	L	A	H	H	E	G	M	G	A	R	V	T	A	S	H	T	T	A	M	H	S	Y	N	G	A	Y	T	S	R	L	F	R	L	L	K	M	S	G	I	N	F	V	A	N	P	L	V	N	I	H	L
Template Known Secondary structure							T										S	S		T	T															T		G	G	G							G	G	G	G	G	S																T
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		I	G	K	N	S	Y	Y	P	D	E	K	R	I	A	M	L	H	A	L	R	D	R	G	L	L	N	R	V	M	L	S	M	D	I	T	R	R	S	H	L	K	A	N	G	G	Y	G	Y	D	Y	L	L	T	T	F	I	P	Q	L	R	Q	.	S	G	F	S	Q	A	D	V	D	V	M	L	R	E	N	P	S	Q
Query Conservation																																																															.
Alig confidence																										.	.											.																									.
Template Conservation																										.	.											.
Template Sequence		Q	G	R	F	D	T	Y	P	K	R	R	G	I	T	R	V	K	E	M	L	E	S	G	I	.	.	N	V	C	F	G	H	D	G	V	F	.	D	P	W	Y	P	L	G	T	A	N	M	L	Q	V	L	H	M	G	L	H	V	C	Q	L	M	G	Y	G	Q	I	N	D	G	L	N	L	I	T	H	H	S	A	R
Template Known Secondary structure		T	T	T	T			S	S														T	T		.	.							B		S	S	.	B	T	T	B	S																	T	T			S						G	G	G	G	G	G	T
Template Predicted Secondary structure																										.	.											.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.			.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	F	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	N
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		360	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions