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Job DescriptionP45548
Confidence100.00%DateThu Jan 5 12:03:05 GMT 2012
Rank7Aligned Residues289
% Identity29%Templatec3pnzD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:phosphotriesterase family protein; PDBTitle: crystal structure of the lactonase lmo2620 from listeria monocytogenes
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.... .....30.........40.........50.........60.........70........
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Query Sequence  MSFDPTGYTLAHEHLHIDLSGFKN. . NVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVV
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Template Sequence  IAPEQLGFTYSHEHIVCVPAYWQERDADDLLLDDKEKSQLDVQDFADLGGKTIVDATAVDYGRRVLDVAQISKETGIQIV
Template Known Secondary structure 
GGGT
S

SB

TT
GGG
B

TT




GGG
B


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   11........20.........30.........40.........50.........60.........70.........80.........90
 
   7980.........90..... ....100.........110.........120.........130.........140
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Query Sequence  ACTGYYQDAFFPEHVAT. . . . . . . . . . . . . . . . . . RSVQELAQEMVDEIEQGIDGTELKAGIIAEIGTSEGKITPLEEKV
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Template Sequence  GTAGFNKSFLWDGKIKPELKPIIGDFETYYEWIENTTTDKLTEFVVNEVENGLEGTPYKAGQVFGTGYNM. . ITPLEEKT
Template Known Secondary structure 
S


GGGGGSB

GGG
S
SBTS
T
GGGSS



B
BTTB..

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   91........100.........110.........120.........130.........140.........150.........160 ........
 
   141........150.........160.........170.........180.........190.........200.........210.........220
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Query Sequence  FIAAALAHNQTGRPISTHTSFSTMGLEQLALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGKNSYYPDE
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Template Sequence  IRAVARAHHETKAPIHSHTEAGTMALEQIEILKQENIPLEYLSIGHMDRNLDPYYHKQVAKTGAFMSFDGIAKIKYAPES
Template Known Secondary structure 


B
GGG

TT

GGGTTGGGS

TTT


TT
TTT

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   170.........180.........190.........200.........210.........220.........230.........240.........
 
   221........230.........240.........250.........260. ........270.... .....280.........290.
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Query Sequence  KRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDYL. . . . . LTTFIPQLRQSGF. SQADVDVMLRENPSQFF
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Template Sequence  ARIAAILYLVSEGFEDQILVSGDTARKTYYKHYGHGPGLEYIAKKWVPRFIDEANEKGFDGEKLVKKFFVDNPARCF
Template Known Secondary structure  TT
GGG




SGGGS

STTTTTS
T
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   250.........260.........270.........280.........290.........300.........310.........320......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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