Job Description P45548 Confidence 99.56% Date Thu Jan 5 12:03:05 GMT 2012 Rank 40 Aligned Residues 251 % Identity 14% Template c3pnuA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dihydroorotase; PDBTitle: 2.4 angstrom crystal structure of dihydroorotase (pyrc) from2 campylobacter jejuni. Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.							.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																																.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.
Query Sequence		G	Y	T	L	A	H	E	H	L	H	I	D	L	S	G	F	K	N	N	V	D	C	R	L	D	Q	Y	A	F	I	C	Q	E	M	N	D	L	M	T	R	G	V	R	N	V	I	E	M	T	N	R	Y	M	G	R	N	A	Q	F	M	L	D	.	.	.	.	.	.	V	M	R	E	T	G	I	N	V	V	A	C
Query Conservation																																																																.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	P	L	D	M	H	L	H	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	N	Q	M	L	E	L	I	A	P	L	S	A	R	D	F	C	A	A	V	I	M	P	N	L	I	P	P	L	C	N	L	E	D	L	K	A	Y	K	M	R	I	L	K	A	C	K	D	E	N	F	T	P	L
Template Known Secondary structure		S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S													T	T		S									S	S				S																T	T	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.																	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	Y	Y	Q	D	A	F	F	P	E	H	V	A	T	R	S	V	Q	E	L	A	Q	E	M	V	D	E	I	E	Q	G	I	D	G	T	E	L	K	A	G	I	I	A	E	I	G	T	S	E	G	K	I	T	P	L	E	E	K	V	F	I	A	A	A	L	A	H	N	Q	T	G	R	P	I	S	T	H	T	S
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	T	L	F	F	K	N	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	F	L	Y	S	A	K	D	E	I	F	G	I	L	Y	P	A	G	I	T	T	N	S	N	G	G	V	S	S	F	D	I	E	Y	L	K	P	T	L	E	A	M	S	D	L	N	I	P	L	L	V	H	G	E
Template Known Secondary structure			B				S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	T		S	B				B	T	T	S	S	S	S		T	T	S	B																		T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.																	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		161	.	.	.							.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.																	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	S	T	M	.	.	.	.	.	.	G	L	E	Q	L	A	L	L	Q	A	H	G	V	D	L	S	R	V	T	V	G	H	C	D	L	K	D	N	L	D	N	I	L	K	M	I	D	L	G	A	Y	V	Q	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	I	G	K	N	S	Y	Y	P
Query Conservation						.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	N	D	F	V	M	D	R	E	S	N	F	A	K	I	Y	E	K	L	A	K	H	F	P	R	L	K	I	V	M	E	H	I	T	T	K	T	L	C	E	L	L	K	D	Y	E	N	L	Y	A	T	I	T	L	H	H	L	I	I	T	L	D	D	V	I	G	G	K	M	N	P	H	L	F	C	K	P	I	A	K
Template Known Secondary structure			S	S		G	G	G	T	T	G	G	G												T	T	S						S			S											T	T							S	G	G	G	T								T	S	S			G	G	G			S	S
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	K	R	I	A	M	L	H	A	L	R	D	R	G	L	L	N	R	V	M	L	S	M	D	I	T	R	R	S	H	L	K	A	N	G	G	Y	G	Y	D	Y	L	L	T	T	F	I	P	Q	L	R	Q	S	G	F	S	Q	A	D	V	D	V	M	L	R	E	N	P	S	Q	F	F
Query Conservation
Alig confidence																						.																																	.
Template Conservation																						.																																	.
Template Sequence		R	Y	E	D	K	E	A	L	C	E	L	A	F	S	G	Y	E	K	V	M	.	F	G	S	D	S	A	P	H	P	K	G	C	A	A	G	V	F	S	A	P	V	I	L	P	V	L	A	E	L	F	K	Q	.	N	S	S	E	E	N	L	Q	K	F	L	S	D	N	T	C	K	I	Y
Template Known Secondary structure															T	T		T	T			.					B				B					S		B			G	G	G												.		S										T
Template Predicted Secondary structure																						.																																	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions