Return to main results Retrieve Phyre Job Id

Job DescriptionP45548
Confidence25.79%DateThu Jan 5 12:03:05 GMT 2012
Rank195Aligned Residues34
% Identity21%Templatec3n7qA_
PDB info PDB header:transcription, replication/dnaChain: A: PDB Molecule:transcription termination factor, mitochondrial; PDBTitle: crystal structure of human mitochondrial mterf fragment (aa 99-399) in2 complex with a 12-mer dna encompassing the trnaleu(uur) binding3 sequence
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   259260.........270.........280.........290..
Predicted Secondary structure 




Query SS confidence 

































Query Sequence  DYLLTTFIPQLRQSGFSQADVDVMLRENPSQFFQ
Query Conservation            
   
 
      
   





 
Alig confidence 

































Template Conservation   
 
  
   
  

 
   
   
   
  

 
Template Sequence  PENLSKRWDLWRKIVTSDLEIVNILERSPESFFR
Template Known Secondary structure  TTTSS

SS
Template Predicted Secondary structure 





Template SS confidence 

































   136...140.........150.........160.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions