Job Description P45548 Confidence 43.19% Date Thu Jan 5 12:03:05 GMT 2012 Rank 171 Aligned Residues 73 % Identity 10% Template c3n6sA_ PDB info PDB header:transcription, replication/dna Chain: A: PDB Molecule:transcription termination factor, mitochondrial; PDBTitle: crystal structure of human mitochondrial mterf in complex with a 15-2 mer dna encompassing the trnaleu(uur) binding sequence Resolution 3.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	S	Y	Y	P	D	E	K	R	I	A	M	L	H	A	L	R	D	R	G	L	L	N	R	V	M	L	S	M	D	I	T	R	R	S	H	L	K	A	N	G	G	Y	G	Y	D	Y	L	L	T	T	F	I	P	Q	L	R	Q	S	G	F	S	Q	A	D	V	D	V	M	L	R	E	N	P	S	Q	F	F	Q
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.
Template Sequence		C	H	N	T	D	S	E	P	L	K	N	E	D	L	L	K	N	L	L	T	M	G	V	D	I	D	M	A	R	K	R	Q	P	G	V	F	H	R	M	I	T	N	.	.	.	.	.	.	.	E	Q	D	L	K	M	F	L	L	S	K	G	A	S	K	E	V	I	A	S	I	I	S	R	Y	P	R	A	I	T	R
Template Known Secondary structure						S																T	T	S														T		S	S			.	.	.	.	.	.	.											T															G	G	G	G	G	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.								.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions