Job Description P45548 Confidence 30.91% Date Thu Jan 5 12:03:05 GMT 2012 Rank 185 Aligned Residues 233 % Identity 7% Template c3l23A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:sugar phosphate isomerase/epimerase; PDBTitle: crystal structure of sugar phosphate isomerase/epimerase2 (yp_001303399.1) from parabacteroides distasonis atcc 8503 at 1.70 a3 resolution Resolution 1.70 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.								.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																							.	.	.																																								.	.	.	.	.	.	.
Query SS confidence																							.	.	.																																								.	.	.	.	.	.	.
Query Sequence		F	I	C	Q	E	M	N	D	L	M	T	R	G	V	R	N	V	I	E	M	T	.	.	.	N	R	Y	M	G	R	N	A	Q	F	M	L	D	V	M	R	E	T	G	I	N	V	V	A	C	T	G	Y	Y	Q	D	A	F	F	P	E	H	V	A	.	.	.	.	.	.	.	T	R	S	V	Q	E	L	A	Q	E
Query Conservation																							.	.	.																																								.	.	.	.	.	.	.
Alig confidence																							.	.	.																																								.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	A	A	N	L	R	K	V	K	D	X	G	Y	S	K	L	E	L	A	G	Y	G	K	G	A	I	G	G	V	P	X	X	D	F	K	K	X	A	E	D	A	G	L	K	I	I	S	S	H	V	N	P	V	D	T	S	I	S	D	P	F	K	A	X	I	F	K	Y	S	K	E	V	T	P	K	I	X	E	Y
Template Known Secondary structure													T	T											T	T			T	T													T	T											B		T	T		S	S	T	T	T	T	B			S			T	T	T
Template Predicted Secondary structure
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.																	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	V	D	E	I	E	Q	G	I	D	G	T	E	L	K	A	G	I	I	A	E	I	G	T	S	E	G	K	I	T	P	L	E	E	K	V	F	I	A	A	A	L	A	H	N	Q	T	G	R	P	I	S	T	H	T	S	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	M	G	L	E	Q
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	K	A	T	A	A	D	H	A	K	L	G	C	K	Y	L	I	Q	P	X	X	P	T	I	T	T	H	D	E	A	K	L	V	C	D	I	F	N	Q	A	S	D	V	I	K	A	E	G	I	A	T	G	F	G	Y	H	N	H	N	X	E	F	N	R	V	A	T	K	E	Q	Q	F	X	K	V	G	D	Q	I	Y
Template Known Secondary structure												T	T		S						S						S																					T	T		T	T								S	G	G	G	S					T	T	T						S
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.				.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																																															.	.	.
Query SS confidence																																															.	.	.
Query Sequence		L	A	L	L	Q	A	H	G	V	D	L	S	R	V	T	V	G	H	C	D	L	K	D	N	L	D	N	I	L	K	M	I	D	L	G	A	Y	V	Q	F	D	T	I	G	K	.	.	.	N	S	Y	Y	P	D	E	K	R	I	A	M	L	H	A	L	R	D	R	G	L	L	N	R	V	M	L	S	M	D	I	T
Query Conservation																																															.	.	.
Alig confidence																																															.	.	.
Template Conservation
Template Sequence		D	L	X	L	K	D	T	D	P	S	K	V	Y	F	E	X	D	V	Y	W	T	V	X	G	Q	N	D	P	V	E	Y	X	Q	K	H	P	D	R	I	K	V	L	H	I	K	D	R	A	V	F	G	Q	S	G	X	X	N	F	E	X	I	F	K	Q	X	Y	A	N	G	I	K	D	Y	F	V	E	L	E	Q	X
Template Known Secondary structure								S		T	T	T													T	T											T	T	T									S	S	S	T	T	S	S	S															T
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	S	H	L	K	A	N	G	G	Y	G	Y	D	Y	L	L	T	T	F	I	P	Q	L	R	Q	S	G	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	P	D	G	R	T	Q	F	A	G	V	K	D	C	A	D	Y	L	I	K	A	P	F
Template Known Secondary structure		.	.	.	.	.	.	.	T	T	S																		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions