Job Description P45548 Confidence 99.05% Date Thu Jan 5 12:03:05 GMT 2012 Rank 75 Aligned Residues 273 % Identity 16% Template c3itcA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:renal dipeptidase; PDBTitle: crystal structure of sco3058 with bound citrate and glycerol Resolution 1.70 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.					.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																				.	.	.	.																																		.	.																				.	.	.	.
Query SS confidence																				.	.	.	.																																		.	.																				.	.	.	.
Query Sequence		D	P	T	G	Y	T	L	A	H	E	H	L	H	I	D	L	S	G	.	.	.	.	F	K	N	N	V	D	C	R	L	D	Q	Y	A	F	I	C	Q	E	M	N	D	L	M	T	R	G	V	R	N	V	I	E	M	.	.	T	N	R	Y	M	G	R	N	A	Q	F	M	L	D	V	M	R	E	T	.	.	.	.
Query Conservation																				.	.	.	.																																		.	.																				.	.	.	.
Alig confidence																				.	.	.	.																																		.	.																				.	.	.	.
Template Conservation
Template Sequence		R	E	F	P	V	V	D	G	H	N	D	L	P	W	A	L	R	E	Q	V	R	Y	D	L	D	A	R	D	I	A	A	D	Q	S	A	H	L	H	T	D	L	A	R	L	R	S	G	G	V	G	A	Q	Y	W	S	V	Y	V	R	S	D	L	P	G	A	V	T	A	T	L	E	Q	I	D	C	V	R	R	L	I
Template Known Secondary structure				S																		T	T		G	G	G	G		T	T	S			T	T	T		S										T												S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
																							74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.							.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	N	V	V	A	C	T	G	Y	Y	Q	D	A	F	F	P	E	H	V	A	T	R	S	V	Q	E	L	A	Q	E	M	V	D	E	I	E	Q	G	I	D	G	T	.	.	.	.	.	.	E	L	K	A	G	I	I	A	E	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.																.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.
Template Sequence		D	R	H	P	G	E	L	R	A	A	L	T	A	A	D	M	E	A	A	R	A	E	G	R	I	A	S	L	M	G	A	E	G	G	H	S	I	D	N	S	.	.	.	.	.	.	.	.	.	L	A	T	L	R	A	L	Y	A	L	G	V	R	Y	M	T	L	T	H	N	D	N	N	A	W	A	D	S	A	T	D
Template Known Secondary structure					T	T	T						S											T											G	G	G	G	T	T		.	.	.	.	.	.	.	.	.										T	T						S		S	S	S		B	T	T	B		B	T	T	S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.										.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.				.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																																																		.	.	.
Query SS confidence																																																		.	.	.
Query Sequence		G	T	S	E	G	K	I	T	P	L	E	E	K	V	F	I	A	A	A	L	A	H	N	Q	T	G	R	P	I	S	T	H	T	S	F	S	T	M	G	L	E	Q	L	A	L	L	Q	A	.	.	.	H	G	V	D	L	S	R	V	T	V	G	H	C	D	L	K	D	N	L	D	N	I	L	K	M	I	D	L	G
Query Conservation																																																		.	.	.
Alig confidence																	.	.	.	.																														.	.	.														.
Template Conservation																	.	.	.	.																																														.
Template Sequence		E	P	G	V	G	G	L	S	A	F	G	R	E	V	V	.	.	.	.	R	E	M	N	R	E	G	M	L	V	D	L	S	H	V	A	A	T	T	M	R	D	A	L	D	T	S	T	A	P	V	I	F	S	H	S	S	S	R	A	V	C	D	H	P	.	R	N	I	P	D	D	V	L	E	R	L	S	A	N	G
Template Known Secondary structure				S	S	S	S	B									.	.	.	.							T						T	T	B													S	S					S	S			B	T	T	T	S			T	.	T	S	B												T
Template Predicted Secondary structure																	.	.	.	.																																														.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.					.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.																																												.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Y	V	Q	F	D	T	I	G	K	N	S	Y	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	E	K	R	I	A	M	L	H	A	L	R	D	R	G	L	L	N	R	V	M	L
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	M	A	M	V	T	F	V	P	K	F	V	L	Q	A	A	V	D	W	T	A	E	A	D	D	N	M	R	A	H	G	F	H	H	L	D	S	S	P	E	A	M	K	V	H	A	A	F	E	E	R	V	P	R	P	V	A	T	V	S	T	V	A	D	H	L	D	H	M	R	E	V	A	G	V	D	H	L	G	I
Template Known Secondary structure																															T	T			T	T			S														S						B																	G	G	G
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	D	I	T	R	R	S	H	L	K	A	N	G	G	Y	G	Y	D	Y	L	L	T	T	F	I	P	Q	L	R	Q	S	G	F	S	Q	A	D	V	D	V	M	L	R	E	N	P	S	Q	F	F	Q
Query Conservation
Alig confidence											.	.
Template Conservation											.	.
Template Sequence		G	G	D	Y	D	G	T	P	F	.	.	T	P	D	G	L	G	D	V	S	G	Y	P	N	L	I	A	E	L	L	D	R	G	W	S	Q	S	D	L	A	K	L	T	W	K	N	A	V	R	V	L	D
Template Known Secondary structure					B	T	S		S		.	.			B	T		S	S	G	G	G											T	T											T
Template Predicted Secondary structure											.	.
Template SS confidence
		318	.	320	.	.	.	.	.	.			.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions