Job Description P45548 Confidence 99.91% Date Thu Jan 5 12:03:05 GMT 2012 Rank 24 Aligned Residues 249 % Identity 11% Template c3irsB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein bb4693; PDBTitle: crystal structure of uncharacterized tim-barrel protein bb4693 from2 bordetella bronchiseptica Resolution 1.76 Å

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		8	.	10	.	.	.	.	.	.	.	.	.																	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Query Sequence		Y	T	L	A	H	E	H	L	H	I	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	F	K	N	N	V	D	C	R	L	D	Q	Y	A	F	I	C	Q	E	M	N	D	L	M	T	R	G	V	R	N	V	I	E	M	.	.	.	T	N	R	Y	M	G	R	N	A	Q	F	M	L	D
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Template Conservation
Template Sequence		I	I	D	F	R	L	R	P	P	A	M	G	F	L	N	A	R	I	Y	T	R	P	D	I	R	N	R	F	T	R	Q	L	G	F	E	P	A	P	S	A	E	E	K	S	L	E	L	M	F	E	E	M	A	A	A	G	I	E	Q	G	V	C	V	G	R	N	S	S	V	L	G	S	V	S	N	A	D	V	A	A
Template Known Secondary structure					S	S	B			S	S	T	T	G	G	G	S																	T									T	T													T												T	T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	R	E	T	G	I	N	V	V	A	C	T	G	Y	Y	Q	D	A	F	F	P	E	H	V	A	T	R	S	V	Q	E	L	A	Q	E	M	V	D	E	I	E	Q	G	I	D	G	T	E	L	K	A	G	I	I	A	E	I	G	T	S	E	G	K	I	T	P	L	E	E	K	V	F	I	A	A	A	L	A	H
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.
Template Sequence		V	A	K	A	Y	P	D	K	F	H	P	V	G	S	I	E	A	A	.	.	.	.	.	.	.	.	.	.	T	R	K	E	A	M	A	Q	M	Q	E	I	L	D	L	G	I	R	I	V	N	L	E	P	G	V	W	A	T	P	M	H	V	D	D	R	R	.	.	.	.	.	.	.	L	Y	P	L	Y	A	F	C
Template Known Secondary structure						S	T	T	T										S	.	.	.	.	.	.	.	.	.	.	S														T	T								G	G	G	S	S	S				T	T		G	G	.	.	.	.	.	.	.	G
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100											.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.								.	.	140	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.						.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																		.	.	.	.	.																																							.
Query SS confidence																		.	.	.	.	.																																							.
Query Sequence		N	Q	T	G	R	P	I	S	T	H	T	S	F	S	T	M	.	.	.	.	.	G	L	E	Q	L	A	L	L	Q	A	H	G	V	D	L	S	R	V	T	V	G	H	C	D	L	K	D	N	L	D	N	I	L	K	M	I	D	L	.	G	A	Y	V	Q	F	D	T	I	G	K	N	S	Y	Y	P	D	E	K	R
Query Conservation																		.	.	.	.	.																																							.
Alig confidence																		.	.	.	.	.																																							.																.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		E	D	N	G	I	P	V	I	M	M	T	G	G	N	A	G	P	D	I	T	Y	T	N	P	E	H	I	D	R	V	L	G	D	F	P	D	L	T	V	V	S	S	H	G	N	W	P	W	V	Q	E	I	I	H	V	A	F	R	R	P	N	L	Y	L	S	P	D	M	Y	L	Y	N	L	P	G	.	.	.	.	.
Template Known Secondary structure				T	T								S	S	S		S	S	S	G	G	G	G													T	T							G	G	G	T	T													T	T						G	G	G	G	S	S	S	T	T	.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	M	L	H	A	L	R	D	R	G	L	L	N	R	V	M	L	S	M	D	I	T	R	R	S	H	L	K	A	N	G	G	Y	G	Y	D	Y	L	L	T	T	F	I	P	Q	L	R	Q	S	G	F	S	Q	A	D	V	D	V	M	L	R	E	N	P	S	Q	F	F
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	A	D	F	I	Q	A	A	N	S	F	L	A	D	R	M	L	F	G	T	A	Y	P	M	C	P	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	E	Y	T	E	W	F	L	T	L	P	I	K	P	D	A	M	E	K	I	L	H	G	N	A	E	R	L	L
Template Known Secondary structure										T	T	T	T	T	T	T	B						B	T	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.										T	S												T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.														.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions