Job Description P45548 Confidence 99.87% Date Thu Jan 5 12:03:05 GMT 2012 Rank 27 Aligned Residues 262 % Identity 11% Template c3ij6A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:uncharacterized metal-dependent hydrolase; PDBTitle: crystal structure of an uncharacterized metal-dependent2 hydrolase from lactobacillus acidophilus Resolution 2.00 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.											.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	Y	T	L	A	H	E	H	L	H	I	D	.	.	.	.	.	.	.	.	.	.	L	S	G	F	K	N	N	V	D	C	R	L	D	Q	Y	A	F	I	C	Q	E	M	N	D	L	M	T	R	G	V	R	N	V	I	E	M	T	N	R	Y	M	G	R	N	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation															.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	K	I	D	A	Y	A	H	I	L	P	A	K	Y	Y	Q	K	M	L	S	V	E	P	N	I	P	N	M	F	P	F	I	K	I	K	T	L	M	D	L	D	E	R	L	T	K	W	P	D	Q	N	T	K	Q	V	I	S	L	A	N	I	S	P	E	D	F	T	D	S	K	T	S	A	E	L	C	Q	S	A
Template Known Secondary structure																									T	T						G	G	G	G													T		S		T	T									S			G	G	G	T	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	F	M	L	D	V	M	R	E	T	G	I	N	V	V	A	C	T	G	Y	Y	Q	D	A	F	F	P	E	H	V	A	T	R	S	V	Q	E	L	A	Q	E	M	V	D	E	I	E	Q	G	I	D	G	T	E	L	K	A	G	I	I	A	E	I	G	T	S	E	G	K	I	T	P	L	E	E	K	V	F	I
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.
Template Sequence		N	E	E	L	S	N	L	V	D	Q	H	P	G	K	F	A	G	A	V	A	I	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	M	N	N	I	E	S	A	C	K	V	I	S	S	I	K	D	D	E	N	L	V	G	A	Q	I	F	T	R	H	L	G	K	S	I	A	D	K	E	.	.	.	.	F	R
Template Known Secondary structure													T	T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	T	T																T	T								S			T	T			T	T	S	T	T	.	.	.	.	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.														.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.					.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.																		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	A	L	A	H	N	Q	T	G	R	P	I	S	T	H	T	S	F	S	T	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	Q	L	A	L	L	Q	A	H	G	V	D	L	S	R	V	T	V	G	H	C	D	L	K	D	N	L	D	N	I	L	K	M	I	D	L	G	A	Y
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	V	L	A	Q	A	A	K	L	H	V	P	L	W	M	H	P	V	F	D	A	R	K	P	D	N	N	L	V	F	S	W	E	Y	E	L	S	Q	A	M	L	Q	L	V	Q	S	D	L	F	Q	D	Y	P	N	L	K	I	L	V	H	H	A	G	A	M	V	P	F	F	S	G	R	I	D	H	I	L	D	E	K
Template Known Secondary structure										T	T											T	T	S	S	S			T	T	T																T	T						T	T						S	G	G	G	T	T	T	T	T	S								S
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	F	D	T	I	G	K	N	S	Y	Y	P	D	E	K	R	I	A	M	L	H	A	L	R	D	R	G	L	L	N	R	V	M	L	S	M	D	I	T	R	R	S	H	L	K	A	N	G	G	Y	G	Y	D	Y	L	L	T	T	F	I	P	Q	L	R	Q	S	G	F	S	Q	A	D	V	D	V	M	L	R	E
Query Conservation
Alig confidence																																																		.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.
Template Sequence		H	A	Q	D	F	K	K	F	Y	V	D	T	A	I	L	G	N	T	P	A	L	Q	L	A	I	D	Y	Y	G	I	D	H	V	L	F	G	T	D	A	P	F	A	V	M	P	S	G	A	.	.	.	.	.	.	.	.	D	Q	I	I	T	Q	A	I	N	D	L	T	I	S	D	K	D	K	Q	K	I	F	H	D
Template Known Secondary structure						G	G	G							S	S	S														G	G	G							B	T	S	S	S	T	T	T		S	.	.	.	.	.	.	.	.										T	S	S	S										T
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.									.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		286	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	S	Q	F	F	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	Y	Y	S	L	I	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions