Job Description P45548 Confidence 99.13% Date Thu Jan 5 12:03:05 GMT 2012 Rank 66 Aligned Residues 264 % Identity 15% Template c3hpaB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:amidohydrolase; PDBTitle: crystal structure of an amidohydrolase gi:44264246 from an2 evironmental sample of sargasso sea Resolution 2.20 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.																			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Query Sequence		G	Y	T	L	A	H	E	H	L	H	I	D	L	S	G	F	K	N	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	C	R	L	D	Q	Y	A	F	I	C	Q	E	M	N	D	L	M	T	R	G	V	R	N	V	I	E	M	.	T	N	R	Y	M	G	R	N	A	Q	F	M	L
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation
Template Sequence		G	L	V	N	T	H	H	H	M	Y	Q	S	L	T	R	A	V	P	A	A	Q	N	A	E	L	F	G	W	L	T	N	L	Y	K	I	W	A	H	L	T	P	E	M	I	E	V	S	T	L	T	A	M	A	E	L	L	Q	S	G	C	T	T	S	S	D	H	L	Y	I	Y	P	N	G	S	R	L	D	D	S	I
Template Known Secondary structure										G	G	G	G	G	S		S						T															T	T																			T	T	T								B					T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	M	R	E	T	G	I	N	V	V	A	C	T	G	Y	Y	Q	D	A	F	F	P	E	H	V	A	T	R	S	V	Q	E	L	A	Q	E	M	V	D	E	I	E	Q	G	I	D	G	T	E	L	K	A	G	I	I	A	E	I	G	T	S	E	G	K	I	T	P	L	E	E	K	V	F	I	A	A	A	L	A
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.
Template Sequence		G	A	A	Q	R	I	G	M	R	F	H	A	S	R	G	A	M	S	E	.	.	.	.	.	.	.	.	.	.	.	.	P	D	I	L	R	D	T	Q	R	L	I	E	T	Y	H	D	E	G	R	Y	A	M	L	R	V	V	V	A	P	C	S	P	F	S	V	S	R	.	.	.	D	L	M	R	D	A	A	V	L
Template Known Secondary structure								T													.	.	.	.	.	.	.	.	.	.	.	.																		S	T	T		S								S		T	T	T	S			.	.	.
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.													.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.				.	.	.	.	.	.	230	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		H	N	Q	T	G	R	P	I	S	T	H	T	S	F	S	T	M	G	L	.	.	E	Q	L	A	L	L	Q	A	H	G	V	D	L	S	R	V	T	V	G	H	C	D	L	K	D	N	L	D	N	I	L	K	M	I	D	L	G	A	Y	V	Q	F	D	T	I	G	K	N	S	Y	Y	P	D	E	K	R	I	A	M
Query Conservation																					.	.
Alig confidence																					.	.																						.																					.	.	.
Template Conservation																																												.																					.	.	.
Template Sequence		A	R	E	Y	G	V	S	L	H	T	H	L	A	E	N	V	N	D	I	A	Y	T	P	A	E	Y	A	E	D	L	G	W	V	G	H	D	V	W	H	A	H	C	.	V	Q	L	D	D	A	G	I	G	L	F	A	R	T	G	T	G	V	A	H	.	.	.	C	P	C	S	N	M	R	L	A	S	G	I	A	P
Template Known Secondary structure						T								S		S					T									T	T	T			S	T	T							.	T	T													T						.	.	.								T	T
Template Predicted Secondary structure																																												.																					.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310				.	.	.	.	.	.	.	.	.	320	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	A	L	R	D	R	G	L	L	N	R	V	M	L	S	M	D	I	T	R	R	S	H	L	K	A	N	G	G	Y	G	Y	D	Y	L	L	T	T	F	I	P	Q	L	R	Q	S	G	F	S	Q	A	D	V	D	V	M	L	R	E	N	P	S	Q	F	F	Q
Query Conservation
Alig confidence											.	.																				.
Template Conservation											.	.																				.
Template Sequence		V	K	K	M	R	L	A	G	V	.	.	P	V	G	L	G	V	D	G	S	A	S	N	D	G	A	Q	M	V	A	.	E	V	R	Q	A	L	L	L	Q	R	V	G	F	G	P	D	A	M	T	A	R	E	A	L	E	I	A	T	L	G	G	A	K	V	L	N
Template Known Secondary structure									T		.	.									T	T	S	S								.															T	T	S	S										T								T
Template Predicted Secondary structure											.	.																				.
Template SS confidence
		332	.	.	.	.	.	.	.	340			.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions