Job Description P45548 Confidence 99.86% Date Thu Jan 5 12:03:05 GMT 2012 Rank 29 Aligned Residues 220 % Identity 15% Template c3guwB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein af_1765; PDBTitle: crystal structure of the tatd-like protein (af1765) from2 archaeoglobus fulgidus, northeast structural genomics3 consortium target gr121 Resolution 3.20 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.													.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	T	L	A	H	E	H	L	H	I	D	L	S	G	F	K	N	N	V	D	C	R	L	D	Q	Y	A	F	I	C	Q	E	M	N	D	L	M	T	R	G	V	R	N	V	I	E	M	T	N	R	Y	M	G	R	N	A	Q	F	.	.	.	.	.	.	.	.	.	.	.	.	M	L	D	V	M	R	E	T	G	I
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	F	D	S	H	L	H	S	E	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	S	E	L	V	K	L	K	E	N	G	I	K	E	V	C	S	L	A	F	F	P	V	K	P	K	Y	P	Q	T	X	I	D	V	F	R	K	L	T	E	F	E	P	L	R	C	E	A	A	G	V
Template Known Secondary structure									G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T	S							B				S	S			S	S														T							T	T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.																		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	V	A	C	T	G	Y	Y	Q	D	A	F	F	P	E	H	V	A	T	R	S	V	Q	E	L	A	Q	E	M	V	D	E	I	E	Q	G	I	D	G	T	E	L	K	A	G	I	I	A	E	I	G	T	S	E	G	K	I	T	P	L	E	E	K	V	F	I	A	A	A	L	A	H	N	Q	T	G	R	P	I
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Template Sequence		K	X	H	P	A	V	G	I	H	P	R	C	I	P	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	F	V	L	G	Y	L	E	E	G	E	W	V	A	F	G	E	I	G	L	E	L	V	T	.	.	.	.	D	E	E	I	E	V	L	K	S	Q	L	E	L	A	K	R	X	D	V	P	C
Template Known Secondary structure						B					G	G	G			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T								T	T	S			S								S	S			.	.	.	.																		T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80															.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.					.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	H	T	S	F	S	T	M	G	L	E	Q	L	A	L	L	Q	A	H	G	V	D	L	S	R	V	T	V	G	H	C	D	L	K	D	N	L	D	N	I	L	K	M	I	D	L	G	A	Y	V	Q	F	D	T	I	G	K	N	S	Y	Y	P	D	E	K	R	I	A	M	L	H	A	L	R	D	R	G	L	L
Query Conservation
Alig confidence																																		.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	I	H	T	P	R	G	N	K	L	K	A	T	R	K	T	L	E	I	L	E	S	L	D	F	P	A	D	L	A	V	I	.	D	H	V	N	F	E	T	L	D	X	V	L	E	T	E	Y	W	I	G	L	T	V	Q	D	A	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	V	A	E	H	G
Template Known Secondary structure							S	S	S	T	T													T	T			T	T	S				.		S			T	T	T						T	S	S	S										T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G
Template Predicted Secondary structure																																		.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.															.	.	.	.	190	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	V	M	L	S	M	D	I	T	R	R	S	H	L	K	A	N	G	G	Y	G	Y	D	Y	L	L	T	T	F	I	P	Q	L	R	Q	S	G	F	S	Q	A	D	V	D	V	M	L	R	E	N	P	S	Q	F	F	Q
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	R	F	X	L	N	S	D	A	G	Y	R	V	A	E	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	I	E	E	A	V	G	R	E	E	X	E	K	V	A	R	E	N	A	R	K	F	L	R
Template Known Secondary structure																		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T							T	T	G	G	G	G					S	S					T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.																.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions