Job Description P45548 Confidence 73.45% Date Thu Jan 5 12:03:05 GMT 2012 Rank 150 Aligned Residues 203 % Identity 20% Template c2w9mB_ PDB info PDB header:dna replication Chain: B: PDB Molecule:polymerase x; PDBTitle: structure of family x dna polymerase from deinococcus2 radiodurans Resolution 2.46 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	H	E	H	L	H	I	D	L	S	G	F	K	N	N	V	D	C	R	L	D	Q	Y	A	F	I	C	Q	E	M	N	D	L	M	T	R	G	V	R	N	V	I	E	M	T	N	R	Y	M	G	R	N	A	Q	F	M	L	D	V	M	R	E	T	G	I	N	V	V	A	C	T	G	Y	Y	Q	D	A	F	F
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.					.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.					.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	I	H	T	H	.	.	.	.	.	.	.	.	.	.	.	S	T	W	S	.	D	G	G	A	S	I	R	E	M	A	E	A	T	L	T	L	G	H	E	F	L	G	T	A	D	H	S	R	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.		T	T	T	.	T		S	S												T	T		S								B	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.					.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		330	.	.	.	.												.	.	.	.		.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		P	E	H	V	A	T	R	S	V	Q	E	L	A	Q	E	M	V	D	E	I	E	Q	G	I	D	G	T	E	L	K	A	G	I	I	A	E	I	G	T	S	E	G	K	I	T	P	L	E	E	K	V	F	I	A	A	A	L	A	H	N	Q	T	G	R	.	P	I	S	T	H	T	S	F	S	T	M	G	L	E	Q
Query Conservation																																																																		.
Alig confidence		.																																															.	.	.	.	.	.	.	.	.									.
Template Conservation		.																																															.	.	.	.	.	.	.	.	.
Template Sequence		.	Y	Y	A	N	G	L	T	I	E	R	L	R	E	Q	L	K	E	I	R	E	L	Q	R	A	G	L	P	I	V	A	G	S	E	V	D	I	L	D	D	G	S	L	D	F	P	D	.	.	.	.	.	.	.	.	.	D	V	L	G	E	L	D	Y	V	V	V	S	V	H	S	N	F	T	L	D	A	A	R	Q
Template Known Secondary structure		.	G	G	G	T		B																		T	T											B		T	T	S		B	S	S			.	.	.	.	.	.	.	.	.				T	T	S	S								S		T	T	S
Template Predicted Secondary structure		.																																															.	.	.	.	.	.	.	.	.
Template SS confidence
			369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.										.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.											.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	L	L	Q	A	H	G	V	D	L	S	R	V	T	V	G	H	C	D	L	K	D	N	L	.	.	.	.	.	.	.	.	.	.	D	N	I	L	K	M	I	D	L	G	A	Y	V	Q	F	D	T	I	G	K	N	S	Y	Y	P	D	E	K	R	I	A	M	L	H	A	L	R	D	R	G	L	L	N	R	V
Query Conservation																											.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.													.	.
Template Conservation																																																													.	.	.	.	.													.	.
Template Sequence		T	E	R	L	I	R	A	V	S	H	P	L	V	T	V	L	G	H	A	T	G	R	L	L	L	R	R	P	G	Y	A	L	D	L	D	A	V	L	G	A	C	E	A	N	G	T	V	V	E	I	N	A	N	A	A	R	L	D	L	.	.	.	.	.	D	W	R	E	A	L	R	W	R	E	R	L	.	.	K	F
Template Known Secondary structure										T		S	S						S	T	T			B	T	T	T	B																		T								S	T	T	T		B	S	.	.	.	.	.									T	T	T		.	.
Template Predicted Secondary structure																																																													.	.	.	.	.													.	.
Template SS confidence
		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.						.	.	500	.	.	.	.	.	.	.	.	.			510	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	S	M	D	I	T	R	R	S	H	L	K	A	N	G	G	Y	G	Y	D	Y	L	L	T	T	F	I	P	Q	L	R	Q	S	G	F	S	Q	A	D	V
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.
Template Sequence		A	I	N	T	D	A	H	.	.	.	.	.	.	.	.	.	V	P	G	G	L	R	D	A	R	Y	G	V	M	Q	A	R	K	A	G	L	T	P	A	H	V
Template Known Secondary structure								S	.	.	.	.	.	.	.	.	.	S	G	G	G	G	G	G											T	T			G	G	G	B
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.
Template SS confidence
		512	.	.	.	.	.	.										.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions