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Job DescriptionP45548
Confidence98.73%DateThu Jan 5 12:03:05 GMT 2012
Rank106Aligned Residues265
% Identity11%Templatec2qs8A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:xaa-pro dipeptidase; PDBTitle: crystal structure of a xaa-pro dipeptidase with bound2 methionine in the active site
Resolution2.33 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40... ......50.........60.........70.........80....
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Query Sequence  GYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDL. . MTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYY
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Template Sequence  GLXDXHVHFGQEYQSKAQAPIKVEREXQAILATQHAYVTFKSGFTTVRQVGDSGLVAISLRDAINSGKLAGPRIFAAGKT
Template Known Secondary structure 

TT




TTTS
S


TT


SSSTTSS




S
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   64.....70.........80.........90.........100.........110.........120.........130.........140...
 
   85....90....... ..100.........110.........120.........130.........140......
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Query Sequence  QDAFFPEHVATRS. . . . . . . . . . . . . . . . . . VQELAQEMVDEIEQGIDGTELKAGIIAEIGTSEGKITPLEEKVFIAAAL
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Template Conservation                                                                                  
Template Sequence  IATTGGHADPTNGKAVDDYDYPVPEQGVVNGPYEVYAAVRQRYKDGADGIKITVTGGVLSVAKSGQNPQFTQEEVDAVVS
Template Known Secondary structure  BTT
TT
TTTT

GGG




GGGT
ST
S
B

SSSSSS
SS
B
S
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   144.....150.........160.........170.........180.........190.........200.........210.........220...
 
   147..150.........160.........170.........180.........190.........200.........210...
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Query Sequence  AHNQTGRPISTHTSFSTMGLEQLALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGK. . . . . . . . . . . . .
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Template Sequence  AAKDYGXWVAVHAHGAEGXKRAIKA. . . . . . . . . GVDSIEHGTFXDLEAXDLXIENGTYYVPTISAGEFVAEKSKIDNFF
Template Known Secondary structure  TT

S.........T
S
TT

T


TTSTTSS
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   224.....230.........240........ .250.........260.........270.........280.........290....
 
   214.....220.........230.........240.........250.........260.........270.........280.......
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Query Sequence  . . . . . . NSYYPDEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDYLLTTFIPQLRQSGFSQADVDVMLRENP
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Template Sequence  PEIVRPKAASVGPQISDTFRKAYEKGV. . KIAFGTDAGVQKHGT. . . . . . . . . . NWKEFVYXVENGXPAXKAIQSATXET
Template Known Secondary structure 
TTTT
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B




BTTB
TT
..........TTTT

TT
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   295....300.........310.........320. ........330...... ...340.........350.........360..
 
   288.290..
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Query Sequence  SQFFQ
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Template Conservation 
  

Template Sequence  AKLLR
Template Known Secondary structure  TT
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   363....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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