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Job DescriptionP45548
Confidence26.71%DateThu Jan 5 12:03:05 GMT 2012
Rank191Aligned Residues143
% Identity15%Templatec2nx9B_
PDB info PDB header:lyaseChain: B: PDB Molecule:oxaloacetate decarboxylase 2, subunit alpha; PDBTitle: crystal structure of the carboxyltransferase domain of the2 oxaloacetate decarboxylase na+ pump from vibrio cholerae
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60.........70.........80.........90.........100.........110.
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Query Sequence  QYAFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYYQDAFFPEHVATRSVQELAQEMVDEIEQ
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Template Sequence  ADDVVDTFVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYTTS. . . . . . . PVHNLQTWVDVAQQLAEL
Template Known Secondary structure 
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T
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   98.100.........110.........120.........130.........140.........150.. .......160.........170
 
   112.......120.........130.........140.........150.........160..... ....170.........180.........190
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Query Sequence  GIDGTELKAGIIAEIGTSEGKITPLEEKVFIAAALAHNQTGRPISTHTSFSTMG. LEQLALLQAHGVDLSRVTVGHCDLK
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Template Sequence  GVDSIALKDMAGILT. . . . . . . . PYAAEELVSTLK. . KQVDVELHLHCHSTAGLADMTLLKAIEAGVDRVDTAISSMSGT
Template Known Secondary structure  T
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   171........180..... ....190....... ..200.........210.........220.........230.........240
 
   191
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Query Sequence  D
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Template Conservation   
Template Sequence  Y
Template Known Secondary structure  T
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   241
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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