Job Description P45548 Confidence 98.98% Date Thu Jan 5 12:03:05 GMT 2012 Rank 82 Aligned Residues 262 % Identity 13% Template c2gseC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:dihydropyrimidinase-related protein 2; PDBTitle: crystal structure of human dihydropyrimidinease-like 2 Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		G	Y	T	L	A	H	E	H	L	H	I	D	L	S	G	F	K	N	N	V	D	C	R	L	D	Q	Y	A	F	I	C	Q	E	M	N	D	L	M	T	R	G	V	R	N	V	I	E	M	T	N	R	Y	M	G	R	N	.	A	Q	F	M	L	D	V	M	R	E	T	G	I	N	V	V	A	C	T	G	Y	Y	Q
Query Conservation																																																										.
Alig confidence													.	.	.	.	.	.	.	.																																						.
Template Conservation													.	.	.	.	.	.	.	.
Template Sequence		G	G	I	D	V	H	T	R	F	Q	M	.	.	.	.	.	.	.	.	P	D	Q	G	M	T	S	A	D	D	F	F	Q	G	T	K	A	A	L	A	G	G	T	T	M	I	I	D	H	V	V	P	E	P	G	T	S	L	L	A	A	F	D	Q	W	R	E	W	A	D	S	K	S	C	C	D	Y	S	L	H	V
Template Known Secondary structure										T	T		.	.	.	.	.	.	.	.			T	T				S	S													T												T	T	S																		S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.									.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	F	F	P	E	H	V	A	T	R	S	V	Q	E	L	A	Q	E	M	V	D	E	I	E	Q	G	I	D	G	T	E	L	K	A	G	I	I	A	E	I	G	T	S	E	G	K	I	T	P	L	E	E	K	V	F	I	A	A	A	L	A	H	N	Q	T	G	R	P	I	S	T	H	T	S	F	S	T	M	G
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Template Sequence		D	I	S	E	W	H	.	.	.	.	.	.	.	.	.	.	.	K	G	I	Q	E	E	M	E	A	L	V	K	D	H	G	V	N	S	F	L	V	Y	M	A	F	K	D	R	F	Q	L	T	D	C	.	.	.	Q	I	Y	E	V	L	S	V	I	R	D	I	G	A	I	A	Q	V	H	A	E	N	G	D	I	I
Template Known Secondary structure				S				.	.	.	.	.	.	.	.	.	.	.	T	T												S									S	S	S	T	T	T	T	B					.	.	.												T	T								S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Template SS confidence
		140	.	.	.	.	.												.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.				180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.																													.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Query Sequence		L	E	Q	L	A	L	L	Q	A	H	G	V	D	L	S	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	G	H	C	D	L	K	D	N	L	D	N	I	L	K	M	I	D	L	G	A	Y	V	Q	F	.	.	.	.	.	.	.	.	.
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	E	Q	Q	R	I	L	D	L	G	I	T	G	P	E	G	H	V	L	S	R	P	E	E	V	E	A	E	A	V	N	R	A	I	T	I	A	N	Q	T	N	C	P	L	Y	I	T	K	V	M	S	K	S	S	A	E	V	I	A	Q	A	R	K	K	G	T	V	V	Y	G	E	P	I	T	A	S	L	G	T
Template Known Secondary structure											T	T			S	T							S																				T										S													T	T								B
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
																209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.												.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	I	G	K	N	S	Y	Y	P	D	E	K	R	I	A	M	L	H	A	L	R	D	R	G	L	L	N	R	V	M	L	S	M	D	I	T	R	R	S	.	.	.	.	.	.	.	.	.	.	.	H	L	K	A	N	G	G	Y	G	Y	D	Y	L	L	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.
Template Sequence		D	G	S	H	Y	W	S	K	N	W	A	K	A	A	A	F	V	T	S	P	P	L	S	P	D	P	T	T	P	D	F	L	N	S	L	L	S	C	G	D	.	.	L	Q	V	T	G	S	A	H	C	T	F	N	T	A	Q	K	A	V	G	K	D	N	F	T	L	I	P	E	G	T	N	G	T	E	E	R	M	S
Template Known Secondary structure			G	G	G	G	G		S								T			S	S				S		T	T												T	S	.	.	S				B			B									G	G	G	T	T		G	G	G	S				B			T	T	T
Template Predicted Secondary structure																																										.	.
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.			.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
		264	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		T	F	I	P	Q	L	R	Q	.	S	G	F	S	Q	A	D	V	D	V	M	L	R	E	N	P	S	Q	F	F	Q
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		V	I	W	D	K	A	V	V	T	G	K	M	D	E	N	Q	F	V	A	V	T	S	T	N	A	A	K	V	F	N
Template Known Secondary structure								T	T	T	S	S	S										T								T
Template Predicted Secondary structure
Template SS confidence
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions