Job Description P45548 Confidence 38.02% Date Thu Jan 5 12:03:05 GMT 2012 Rank 174 Aligned Residues 147 % Identity 10% Template c1ypxA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative vitamin-b12 independent methionine synthase family PDBTitle: crystal structure of the putative vitamin-b12 independent methionine2 synthase from listeria monocytogenes, northeast structural genomics3 target lmr13 Resolution 2.60 Å

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.				.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																																								.	.	.
Query SS confidence																																																								.	.	.
Query Sequence		V	Q	E	L	A	Q	E	M	V	D	E	I	E	Q	G	I	D	G	T	E	L	K	A	G	I	I	A	E	I	G	T	S	E	G	K	I	T	P	L	E	E	K	V	F	I	A	A	A	L	A	H	N	Q	T	.	.	.	G	R	P	I	S	T	H	T	S	F	S	T	M	G	L	E	Q	L	A	L	L	Q	A
Query Conservation																																																								.	.	.
Alig confidence																																																								.	.	.
Template Conservation
Template Sequence		A	T	A	Y	Q	K	A	I	Q	A	F	Y	D	A	G	C	R	Y	L	Q	L	D	D	T	S	W	S	Y	L	C	S	D	E	G	F	D	P	E	T	L	Q	E	T	Y	K	N	L	I	N	E	A	I	K	H	K	P	A	D	X	V	I	T	X	H	I	C	R	G	G	Y	G	P	V	A	E	T	L	F	G	K
Template Known Secondary structure															T	T														T	T	S					S	T	T	T													T	T	T			T	T													S	G	G	G					T	T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		H	G	V	D	L	S	R	V	T	V	G	H	C	D	L	K	D	N	L	D	N	I	L	K	M	I	D	L	G	A	Y	V	Q	F	D	T	I	.	G	K	N	S	Y	Y	P	D	E	K	R	I	A	M	L	H	A	L	R	D	R	G	L	L	N	R	V	M	L	S	M	D	I	T	R	R	S
Query Conservation																																							.
Alig confidence						.	.	.	.																														.
Template Conservation						.	.	.	.
Template Sequence		L	N	I	D	.	.	.	.	G	F	F	L	E	Y	D	N	E	R	F	A	P	L	K	Y	V	T	R	P	D	L	K	I	V	L	G	L	I	T	S	K	T	G	E	E	D	E	A	A	I	K	A	R	I	E	E	A	S	E	I	V	P	L	S	Q	L	R	L	S	P	Q	C	G	F	A	T
Template Known Secondary structure					S	.	.	.	.								S					T	T						T	T										S	S	S					S														S		G	G	G						S	S
Template Predicted Secondary structure						.	.	.	.
Template SS confidence
		264	.	.	.					.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions