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Job DescriptionP45548
Confidence97.51%DateThu Jan 5 12:03:05 GMT 2012
Rank132Aligned Residues257
% Identity10%Templatec1o12B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:n-acetylglucosamine-6-phosphate deacetylase; PDBTitle: crystal structure of n-acetylglucosamine-6-phosphate2 deacetylase (tm0814) from thermotoga maritima at 2.5 a3 resolution
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60 .........70.........80..
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Query Sequence  GYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNRYMG. . . . RNAQFMLDVMRETGINVVACTG
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Template Sequence  GFVDPHIHG. . . . . . . . . . VVGADTXNCDFSEXEEFLYSQGVTTFLATTVSTSLEKXKEILRKARDYILENPSTSLLGVH
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..........TTTTTT
TTT

S

STT
S
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   44.....50.. .......60.........70.........80.........90.........100.........110...
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  YYQDAFFPEHVATRSVQELAQEMVDEIEQGIDGTELKAGIIAEIGTSEGKITPLEEKVFIAAALAHNQTGRPISTHTSFS
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Template Sequence  LEGPYISKEKKGAHSEKHIRPPSERELSEIDSPAKXLTFAPEIESS. . . . . . . . . . . . . ELLLRLVKRDIVLSAGHSIAT
Template Known Secondary structure 
SSS
STT
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TTT




T

TT
TTSTTG.............GGGGGGGGGT

SB


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   114.....120.........130.........140.........150......... 160.........170.........180
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  TMGLEQLALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGKNSYYPDEKRIAMLHALRDRGLLNRVMLSM
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Template Sequence  FEEFXKFYKEGVKRITHFPNGLKPLHHREIGITGAGLLLDDVKLELICDGVHLS. . . . . . REXVKLVYKVKKANGIVLVT
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SSTTTTB



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   181........190.........200.........210.........220.........230.... .....240.........250....
 
   243...... 250.........260.........270. ........280.........290..
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Query Sequence  DITRRSH. . . . . . . . . . . . . . . . . . . . . LKANGGYGYDYLLTTFIPQLRQ. SGFSQADVDVMLRENPSQFFQ
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Template Sequence  DSISAAGLKDGTTTLGDLVVKVKDGVPRLEDGTLAGSTLFFSQAVKNFRKFTGCSITELAKVSSYNSCVELG
Template Known Secondary structure 
B
TTTTS
STTTT
TTS
B

B





TT
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   255....260.........270.........280.........290.........300.........310.........320......
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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