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Job DescriptionP45548
Confidence99.04%DateThu Jan 5 12:03:05 GMT 2012
Rank76Aligned Residues270
% Identity18%Templatec1nfgA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:d-hydantoinase; PDBTitle: structure of d-hydantoinase
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.. .......70.........80.....
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Query Sequence  GYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNRYMGRN. AQFMLDVMRETGINVVACTGYYQ
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Template Sequence  GGIDVHTHVET. . . . . . . . VSFNTQSADTFATATVAAACGGTTTIVDFCQQDRGHSLAEAVAKWDGMAGGKSAIDYGYHI
Template Known Secondary structure 


S
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S

TT

TTS
TTT
SS
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   52.......60.. .......70.........80.........90.........100.........110.........120...
 
   86...90. ........100...... ...110.........120......
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Query Sequence  DAFFPE. . . . . . . . . . . . . . . . . . . . . . . . HVATRSVQELAQEMV. . . . . . . . . . . . . . . DEIEQGIDGTELKAGIIAEI
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Template Conservation                     
                                                            
Template Sequence  IVLDPTDSVIEELEVLPDLGITSFVFMAYRGMNMIDDVTLLKTLDKAVKTGSLVMVHAENGDAADYLRDKFVAEGKTAPI
Template Known Secondary structure 
SS

TTTGGGGT

B

BSSSTTTTB

T
BB


TT

ST
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   124.....130.........140.........150.........160.........170.........180.........190.........200...
 
   127..130.........140.........150.........160.........170.........180.........190.........200......
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Query Sequence  GTSEGKITPLEEKVFIAAALAHNQTGRPISTHTSFSTMGLEQLALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYV
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Template Conservation                                            
      
         
                    
Template Sequence  YHALSRPPRVEAEATARALALAEIVNAPIYIVHVTCEESLEEVMRAKSRGVRALAETCTHYLYLTKEDLERPDFEGAKYV
Template Known Secondary structure  TS
T





ST


GGGGT

GGGGG
TTTGGGGG
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   205....210.........220.........230.........240.........250.........260.........270.........280....
 
   207..210.........220.........230.........240.........250. ........260.........270....
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Query Sequence  QFDTIGKNSYYPDEKRIAMLHALRDRGLLNRVMLSMDITRRSHLK. . . . . . . . . . . . ANGGYGYDYLLTTFIPQLRQSGF
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Template Sequence  F. . . . . . TPPARAKKDHDVLWNALRNGVFE. . TVSSDHCSWLFKGHKDRGRNDFRAIPNGAPGVEERLMMVYQGVNEGRI
Template Known Secondary structure 
......SS



TT

S..


B



TTTTTTTTTT
GGGS


B

TTTTTSS
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   285 ....290.........300........ .310.........320.........330.........340.........350......
 
   275....280.........290..
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Query Sequence  SQADVDVMLRENPSQFFQ
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Template Sequence  SLTQFVELVATRPAKVFG
Template Known Secondary structure 
TTT
Template Predicted Secondary structure 


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   357..360.........370....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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