Return to main results Retrieve Phyre Job Id

Job DescriptionP77674
Confidence100.00%DateThu Jan 5 12:31:36 GMT 2012
Rank11Aligned Residues472
% Identity38%Templated1ag8a_
SCOP infoALDH-like ALDH-like ALDH-like
Resolution2.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.... .....20.........30.........40.........50.. .......60.........70......
Predicted Secondary structure 







.












...


Query SS confidence 













.





































. . .























Query Sequence  MQHKLLINGELVSG. EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAF. . . AEWGQTTPKVRAECLLKLADVIEE
Query Conservation        
 
     .      
  
 

  
          
  

  
  
 ...  
       
   
   
  
  
Alig confidence 













.





































...























Template Conservation       

 
               
 

  
     
    
  

 

  
      
       
   
   
  
  
Template Sequence  LYNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAFQLGSPWRRMDASERGRLLNRLADLIER
Template Known Secondary structure 


SSSS


TT


TTT


B
TSTT
S
Template Predicted Secondary structure 























Template SS confidence 















































































   18.20.........30.........40.........50.........60.........70.........80.........90.......
 
   77..80.........90.........100.........110.........120.........130.........140.........150......
Predicted Secondary structure 





















Query SS confidence 















































































Query Sequence  NGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAA
Query Conservation      

     
 

    
   

                                    
 


  
 
 
 
     
Alig confidence 














































.































Template Conservation      

     
 

    
   

      
               .             
 


  
 
 
 
     
Template Sequence  DRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYYAGWADKYHGKTI. PIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQA
Template Known Secondary structure  T
S
TTTTTT



.

SSS



SSS
Template Predicted Secondary structure 








.













Template SS confidence 















































































   98.100.........110.........120.........130.........140.... .....150.........160.........170......
 
   157..160.........170.........180.........190 .........200.........210.........220.........230.....
Predicted Secondary structure 





.















Query SS confidence 

































.












































Query Sequence  WKLAPALAAGNCVVLKPSEITPLTALKLAELAKD. IFPAGVINILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISH
Query Conservation       

 


 





         
  
   .  
   
  
          
     
  
 



   
  
   
Alig confidence 

































.












































Template Conservation       





 





         
 
 
 




 
 
  
          
     
  
 



   
  
   
Template Sequence  WKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVA
Template Known Secondary structure  T

TTS
T

TTSB
T
TT

S
Template Predicted Secondary structure 




























Template SS confidence 















































































   177..180.........190.........200.........210.........220.........230.........240.........250......
 
   236.. .240.........250.........260.........270.........280.........290.........300.........310....
Predicted Secondary structure 
.

































Query SS confidence 


.











































































Query Sequence  TAS. SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDD
Query Conservation     .       



    

  



  

  
   
    

 
 
   
 
     
 
   
         
    
Alig confidence 


.











































































Template Conservation 
      
   
 

    

  


   

  

       

 
 
   


     
 
   
      
  
 
  
Template Sequence  AGKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYAEFVERSVARAKSRVVGNPFD
Template Known Secondary structure  TT







TTS
GGGG

TT




B

TTS
Template Predicted Secondary structure 

































Template SS confidence 















































































   257..260.........270.........280.........290.........300.........310.........320.........330......
 
   315....320.........330.........340.........350.........360.........370.........380.........390....
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  ESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQ
Query Conservation       

 
           
  
   

                  



            
 




 
       
Alig confidence 


































.











































Template Conservation       


            
  
   

  
   .      
    



           

 




 
       
Template Sequence  SRTEQGPQVDETQFKKVLGYIKSGKEEGLKLLCGG. GAAADRGYFIQPTVFGDLQDGMTIAKEEIFGPVMQILKFKSMEE
Template Known Secondary structure  TT
SB


SST


.SBS
SSS

B

S

TTSS


SS

Template Predicted Secondary structure 













.






















Template SS confidence 















































































   337..340.........350.........360.........370. ........380.........390.........400.........410.....
 
   395....400.........410.........420.........430.........440.........450.........460.........470....
Predicted Secondary structure 








































Query SS confidence 















































































Query Sequence  VVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVKH
Query Conservation 

   
    

 
 
 
 
   
      
  
 
 

         



   

 
   
   
   
  
 
 
  
Alig confidence 















































































Template Conservation 

   
    

 
 
 
 
          
  
 
 

         



   

 
   
   
  
   
 
    
Template Sequence  VVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGSGRELGEYGLQAYTEVKTVTVRV
Template Known Secondary structure 
SS

S
S
S

SS
SS


TTS



SSTTS

STTTT
Template Predicted Secondary structure 







































Template SS confidence 















































































   416...420.........430.........440.........450.........460.........470.........480.........490.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions