Job Description P77674 Confidence 100.00% Date Thu Jan 5 12:31:36 GMT 2012 Rank 15 Aligned Residues 471 % Identity 38% Template c3r31A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:betaine aldehyde dehydrogenase; PDBTitle: crystal structure of betaine aldehyde dehydrogenase from agrobacterium2 tumefaciens Resolution 2.15 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		Q	H	K	L	L	I	N	G	E	L	V	S	G	.	E	G	E	K	Q	P	V	Y	N	P	A	T	G	D	V	L	L	E	I	A	E	A	S	A	E	Q	V	D	A	A	V	R	A	A	D	A	A	F	A	E	W	G	Q	T	T	P	K	V	R	A	E	C	L	L	K	L	A	D	V	I	E	E	N	G	Q	V
Query Conservation															.
Alig confidence															.
Template Conservation
Template Sequence		K	A	S	H	F	I	D	G	D	Y	V	E	D	N	T	G	T	P	F	E	S	I	F	P	A	T	G	E	M	I	A	K	L	H	A	A	T	P	A	I	V	E	R	A	I	A	S	A	K	R	A	Q	K	E	W	A	A	M	S	P	M	A	R	G	R	I	L	K	R	A	A	D	I	M	R	E	R	N	D	A
Template Known Secondary structure		S	S	S				T	T						T	T	S								T	T	T																																S																			T
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	E	L	E	S	R	N	C	G	K	P	L	H	S	A	F	N	D	E	I	P	A	I	V	D	V	F	R	F	F	A	G	A	A	R	C	L	N	G	L	A	A	G	E	Y	L	E	G	H	T	S	M	I	R	R	D	P	L	G	V	V	A	S	I	A	P	W	N	Y	P	L	M	M	A	A	W	K	L	A
Query Conservation
Alig confidence																																																.
Template Conservation																																																.
Template Sequence		L	S	T	L	E	T	L	D	T	G	K	P	I	Q	E	T	I	V	A	D	P	T	S	G	A	D	A	F	E	F	F	G	G	I	A	P	S	A	L	N	G	D	Y	I	P	L	.	G	G	D	F	A	Y	T	K	R	V	P	L	G	V	C	V	G	I	G	A	W	N	Y	P	Q	Q	I	A	C	W	K	A	A
Template Known Secondary structure																					S																			T								.	S	S	S										S								S	S	S
Template Predicted Secondary structure																																																.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		P	A	L	A	A	G	N	C	V	V	L	K	P	S	E	I	T	P	L	T	A	L	K	L	A	E	L	A	K	D	.	I	F	P	A	G	V	I	N	I	L	F	G	R	G	K	T	V	G	D	P	L	T	G	H	P	K	V	R	M	V	S	L	T	G	S	I	A	T	G	E	H	I	I	S	H	T	A	S	S
Query Conservation																																.
Alig confidence																																.															.
Template Conservation																																															.
Template Sequence		P	A	L	V	A	G	N	A	M	V	F	K	P	S	E	N	T	P	L	G	A	L	K	I	A	E	I	L	I	E	A	G	L	P	K	G	L	F	N	V	I	Q	G	D	R	.	D	T	G	P	L	L	V	N	H	P	D	V	A	K	V	S	L	T	G	S	V	P	T	G	R	K	V	A	A	A	A	A	G	H
Template Known Secondary structure						T	T									T	T	S		S												T	T			T	T	S								T	.	T							T		T	T								S															T
Template Predicted Secondary structure																																															.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	R	T	H	M	E	L	G	G	K	A	P	V	I	V	F	D	D	A	D	I	E	A	V	V	E	G	V	R	T	F	G	Y	Y	N	A	G	Q	D	C	T	A	A	C	R	I	Y	A	Q	K	G	I	Y	D	T	L	V	E	K	L	G	A	A	V	A	T	L	K	S	G	A	P	D	D	E	S	T	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	H	V	T	M	E	L	G	G	K	S	P	M	I	V	F	D	D	A	D	I	E	S	A	V	G	G	A	M	L	G	N	F	Y	S	S	G	Q	V	C	S	N	G	T	R	V	F	V	Q	K	K	A	K	A	R	F	L	E	N	L	K	R	R	T	E	A	M	I	L	G	D	P	L	D	Y	A	T	H	L
Template Known Secondary structure		T																	T	T	S														T	S							T	T								G	G	G																	B			T	T	S	T	T		S	B
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.			.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.
Query SS confidence																																							.	.
Query Sequence		G	P	L	S	S	L	A	H	L	E	R	V	G	K	A	V	E	E	A	K	A	T	G	H	I	K	V	I	T	G	G	E	K	R	K	G	N	.	.	G	Y	Y	Y	A	P	T	L	L	A	G	A	L	Q	D	D	A	I	V	Q	K	E	V	F	G	P	V	V	S	V	T	P	F	D	N	E	E	Q	V	V	N
Query Conservation																																							.	.
Alig confidence																																							.	.
Template Conservation
Template Sequence		G	P	L	V	S	K	A	Q	Q	E	K	V	L	S	Y	I	E	K	G	K	A	E	G	A	T	L	I	T	G	G	G	I	P	N	N	V	A	G	E	G	A	Y	V	Q	P	T	V	F	A	D	V	T	D	D	M	T	I	A	R	E	E	I	F	G	P	V	M	C	V	L	D	F	D	D	E	D	E	V	L	A
Template Known Secondary structure				B	S																			T								S			S	S			S	S	S	B												T	T	S					S			S	S	S
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	A	N	D	S	Q	Y	G	L	A	S	S	V	W	T	K	D	V	G	R	A	H	R	V	S	A	R	L	Q	Y	G	C	T	W	V	N	T	H	F	M	L	V	S	E	M	P	H	G	G	Q	K	L	S	G	Y	G	K	D	M	S	L	Y	G	L	E	D	Y	T	V	V	R	H	V	M	V	K	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	N	A	T	E	F	G	L	A	G	G	V	F	T	A	D	L	A	R	A	H	R	V	V	D	G	L	E	A	G	T	L	W	I	N	T	Y	N	L	C	P	V	E	I	P	F	G	G	S	K	Q	S	G	F	G	R	E	N	S	A	A	A	L	E	H	Y	S	E	L	K	T	V	Y	V	S	T
Template Known Secondary structure						S	S			S							S												S			S					S	S						T	T	S		B					T	T					B	S	T	G	G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.