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Job DescriptionP77674
Confidence100.00%DateThu Jan 5 12:31:36 GMT 2012
Rank40Aligned Residues426
% Identity24%Templatec3lnsD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:benzaldehyde dehydrogenase; PDBTitle: benzaldehyde dehydrogenase, a class 3 aldehyde dehydrogenase, with2 bound nadp+ and benzoate adduct
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40.........50.........60.........70.........80.........90.........100.........110....
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Query Sequence  EASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGA
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Template Conservation    
   
  
   
  
   
       
   
      
      
      
 

    
   

      
      
Template Sequence  YLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAVLHEIDFALAH
Template Known Secondary structure 


TTTT
STT


T
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   115....120. ........130.........140.........150.........160.........170.........180.........190.
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Query Sequence  ARCLNGL. . . AAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI
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Template Sequence  LDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEA
Template Known Secondary structure  TS



GGG
S




SSSTTTT


TT
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   192.......200.........210.........220.........230.........240.........250.........260.........270.
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Query Sequence  FPAGVINILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTF
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Template Sequence  FAPEYVAVIQG. GRDENSHLLSLP. FDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFG
Template Known Secondary structure 

TTT


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TS
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SS
TTT






TT

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   163......170... ......180..... ....190.........200.........210.........220.........230.........240
 
   272.......280.........290.........300.........310.........320.........330.........340.........350.
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Query Sequence  GYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGE
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Template Sequence  KFINSGQ. TIAPDYLYVHYSVKDALLERLVERVKTEL. . . . . PEINSTGKLVTERQVQRLVSLLEAT. . . QGQVLVGSQA
Template Known Secondary structure  GGGG
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GGG
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   241...... ..250.........260.........270...... ...280.........290.........300. ........310.
 
   352.......360.........370.........380.........390.........400. ........410.........420.........430
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Query Sequence  KRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWAND. SQYGLASSVWTKDVGRAHRVSARLQYGCT
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Template Sequence  . . DVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDA
Template Known Secondary structure  ..GGGT

S

TTSGGGSS


SSS
S
S
S
S
TS

S
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   313......320.........330.........340.........350.........360.........370.........380.........390
 
   431....... .440.........450.........460.........470...
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Query Sequence  WVNTHFML. . VSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK
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Template Sequence  QVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV
Template Known Secondary structure  S

SGGGG
TTS
B


GGG

BST
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   391........400.........410.........420.........430.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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