Job Description P77674 Confidence 100.00% Date Thu Jan 5 12:31:36 GMT 2012 Rank 41 Aligned Residues 414 % Identity 16% Template c3k9dD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:aldehyde dehydrogenase; PDBTitle: crystal structure of probable aldehyde dehydrogenase from listeria2 monocytogenes egd-e Resolution 2.00 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	E	Q	V	D	A	A	V	R	A	A	D	A	A	F	A	E	W	G	Q	T	T	P	K	V	R	A	E	C	L	L	K	L	A	D	V	I	E	E	N	G	Q	V	F	A	E	L	E	S	R	N	C	G	K	P	L	H	S	A	F	N	D	E	I	P	A	I	V	D	V	F	R	F	F	A	G	A	A	R
Query Conservation
Alig confidence																																																														.	.	.
Template Conservation																																																														.	.	.
Template Sequence		S	I	Q	E	V	R	N	L	I	E	S	A	N	K	A	Q	K	E	L	A	A	M	S	Q	Q	Q	I	D	T	I	V	K	A	I	A	D	A	G	Y	G	A	R	E	K	L	A	K	M	A	H	E	E	T	G	F	G	I	W	Q	D	.	.	.	K	V	I	K	N	V	F	A	S	K	H	V	Y	N	Y	I	K
Template Known Secondary structure																					S	S																				T															S					.	.	.																	T
Template Predicted Secondary structure																																																														.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190						.
Predicted Secondary structure																																																																												.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.
Query Sequence		C	L	N	G	L	A	A	G	E	Y	L	E	G	H	T	S	M	I	R	R	D	P	L	G	V	V	A	S	I	A	P	W	N	Y	P	L	M	M	A	A	W	K	L	A	P	A	L	A	A	G	N	C	V	V	L	K	P	S	E	I	T	P	L	T	A	L	K	L	A	E	L	A	K	D	.	.	.	.	.	I
Query Conservation																																																																												.	.	.	.	.
Alig confidence																																																																												.	.	.	.	.
Template Conservation
Template Sequence		D	M	K	T	I	G	M	L	K	E	D	N	E	K	K	V	M	E	V	A	V	P	L	G	V	V	A	G	L	I	P	S	T	N	P	T	S	T	V	I	Y	K	T	L	I	S	I	K	A	G	N	S	I	V	F	S	P	H	P	N	A	L	K	A	I	L	E	T	V	R	I	I	S	E	A	A	E	K	A	G
Template Known Secondary structure		T				S							T	T	T	T																	S	S	S															T	T									G	G	G																			T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	A	G	V	I	N	I	L	F	G	R	G	K	T	V	G	D	P	L	T	G	H	P	K	V	R	M	V	S	L	T	G	S	I	A	T	G	E	H	I	I	S	H	T	A	S	S	I	K	R	T	H	M	E	L	G	G	K	A	P	V	I	V	F	D	D	A	D	I	E	A	V	V	E	G	V	R	T	F
Query Conservation
Alig confidence																																													.	.	.	.
Template Conservation																																													.	.	.	.
Template Sequence		C	P	K	G	A	I	S	C	M	T	V	P	T	I	Q	G	T	D	Q	L	M	K	H	K	D	T	A	V	I	L	A	T	G	G	S	A	M	V	K	A	A	Y	S	.	.	.	.	S	G	T	P	A	I	G	V	G	P	G	N	G	P	A	F	I	E	R	S	A	N	I	P	R	A	V	K	H	I	L	D	S
Template Known Secondary structure				T	T	S					S	S													T	T								S										T	.	.	.	.	S	S	S					B											T	T	S
Template Predicted Secondary structure																																													.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.					210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.									.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.
Query Sequence		G	Y	Y	N	A	G	Q	D	C	T	A	A	C	R	I	Y	A	Q	K	G	I	Y	D	T	L	V	E	K	L	G	A	A	V	A	T	L	K	S	G	A	P	.	.	.	.	.	.	.	.	D	D	E	S	T	E	L	G	P	L	S	S	L	A	H	L	E	R	V	G	K	A	V	E	E	A	K	A	T	G	H
Query Conservation																																											.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	T	F	D	N	G	T	I	C	A	S	E	Q	S	V	V	V	E	R	V	N	K	E	A	V	I	A	E	F	R	K	Q	G	A	H	F	L	S	D	A	E	A	V	Q	L	G	K	F	I	L	R	P	N	G	S	M	N	P	A	I	V	G	K	S	V	Q	H	I	A	N	L	A	G	L	T	V	P	A	D	A
Template Known Secondary structure			T	G	G	G	G	T	S	T	T	S								T	T	T											T	T																	B		T	T	S		B		T	T	T	T	T											T					T	T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.					.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.
Query SS confidence																																																															.	.	.	.
Query Sequence		I	K	V	I	T	G	G	E	K	R	K	G	N	G	Y	Y	Y	A	P	T	L	L	A	G	A	L	Q	D	D	A	I	V	Q	K	E	V	F	G	P	V	V	S	V	T	P	F	D	N	E	E	Q	V	V	N	W	A	N	D	S	Q	Y	.	.	.	.	G	L	A	S	S	V	W	T	K	D	V	G	R	A	H
Query Conservation																																																															.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.																																						.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	L	I	A	E	E	T	.	.	.	K	V	G	A	K	I	P	Y	S	R	E	K	L	A	P	I	L	A	F	Y	T	A	E	T	W	Q	E	A	C	E	L	S	M	D	I	L	Y	H	E	G	A	G	H	T	L	I	I	H	S	E	D	K	E	I	I	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.			S	S	S		T	T	T	S				S	S								S	S													T	T	T	T	T	T	S							S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.
Template SS confidence
															323	.	.	.	.	.	.	330				.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.		.	440	.	.	.	.	.	.	.	.	.	450			.	.	.	.	.	.	.	.	.						460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure																					.													.	.										.	.	.	.	.
Query SS confidence																					.													.	.										.	.	.	.	.
Query Sequence		R	V	S	A	R	L	Q	Y	G	C	T	W	V	N	T	H	F	M	L	.	V	S	E	M	P	H	G	G	Q	K	L	S	.	.	G	Y	G	K	D	M	S	L	Y	.	.	.	.	.	G	L	E	D	Y	T	V	V	R	H	V	M	V	K
Query Conservation																					.													.	.										.	.	.	.	.
Alig confidence																					.													.	.										.	.	.	.	.
Template Conservation
Template Sequence		E	F	A	L	K	K	P	V	S	R	L	L	V	N	T	P	G	A	L	G	G	I	G	A	T	T	N	L	V	P	A	L	T	L	G	C	G	A	V	G	G	S	S	S	S	D	N	I	G	P	E	N	L	F	N	I	R	R	I	A	T	G
Template Known Secondary structure								S		S					S	S							T	T	S	S	S	S	S				S		B	B		T	G	G	G	T		S			S	B			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.