Return to main results Retrieve Phyre Job Id

Job DescriptionP77674
Confidence100.00%DateThu Jan 5 12:31:36 GMT 2012
Rank14Aligned Residues471
% Identity37%Templatec3iwkB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:aminoaldehyde dehydrogenase; PDBTitle: crystal structure of aminoaldehyde dehydrogenase 1 from2 pisum sativum (psamadh1)
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.... .....20.........30.........40.........50.. .......60.........70......
Predicted Secondary structure 





.












.....


Query SS confidence 











.





































. . . . .























Query Sequence  HKLLINGELVSG. EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAF. . . . . AEWGQTTPKVRAECLLKLADVIEE
Query Conservation      
 
     .      
  
 

  
          
  

  
  
 .....  
       
   
   
  
  
Alig confidence 











.





































.....























Template Conservation      
 
               
 

  
          
  

  
  
        
       
   
   
  
  
Template Sequence  RQLFIDGEWRVPILNKRIPNINPSTENIIGDIPAATKEDVDLAVDAAKRAISRKNGRDWSAASGSLRARYLRAIAAKIKE
Template Known Secondary structure 

TT

TT


TTT




GGGGTTTTSS
Template Predicted Secondary structure 



























Template SS confidence 















































































   8.10.........20.........30.........40.........50.........60.........70.........80.......
 
   77..80.........90.........100.........110.........120. ........130.........140.........150...
Predicted Secondary structure 







...













Query SS confidence 












































. . .































Query Sequence  NGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGL. . . AAGEYLEGHTSMIRRDPLGVVASIAPWNYPLM
Query Conservation      

     
 

    
   

                    ...                
 


  
 
 
 
  
Alig confidence 





















.





















...































Template Conservation     

      



    
  .

      
                                
 


  
 
 
 
  
Template Sequence  KKDELGKLESIDCGKPLEEALA. DLDDVVACFEYYAGLAEELDSKQKAPISLPMDTFKSYILKEPIGVVALITPWNYPFL
Template Known Secondary structure  T


.GGGTT

S
SS



SSS
Template Predicted Secondary structure 



.






















Template SS confidence 















































































   88.90.........100......... 110.........120.........130.........140.........150.........160......
 
   154.....160.........170.........180.........190 .........200.........210.........220.........230..
Predicted Secondary structure 





.















Query SS confidence 




































.









































Query Sequence  MAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKD. IFPAGVINILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHI
Query Conservation          

 


 





         
  
   .  
   
  
          
     
  
 



   
  
Alig confidence 




































.









































Template Conservation          

 


 

 


   
 
   
      

 
 
 
  
          
     
  
 



   
  
Template Sequence  MATWKIAPALAAGCAAILKPSELASVTCLELGEICKEVGLPRGVLNIVTGLGHEAGASLASHPDVDKISFTGSSATGSKI
Template Known Secondary structure  T


TTS
T

TTS



TTTT
TT

S
Template Predicted Secondary structure 























Template SS confidence 















































































   167..170.........180.........190.........200.........210.........220.........230.........240......
 
   233......240.........250.........260.........270.........280.........290.........300.........310..
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  ISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAP
Query Conservation               



    

  



  

  
   
    

 
 
   
 
     
 
   
         
  
Alig confidence 















































































Template Conservation     
         
 

    

  


   

  

       

 
 
   
 
   
 
 
   
      
  
  
Template Sequence  MTTAAQLVKPVSLELGGKSPIVVFEDVDLDKVAEWTVFGCFFTNGQICSATSRLIVHESIAVEFVDKLVKWAENIKISDP
Template Known Secondary structure  TT






SSS
GGGG

TT
S
BS
T
Template Predicted Secondary structure 




























Template SS confidence 















































































   247..250.........260.........270.........280.........290.........300.........310.........320......
 
   313......320.........330.........340.........350...... ...360.........370.........380.........390.
Predicted Secondary structure 























.














Query SS confidence 











































.


































Query Sequence  DDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGN. GYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDN
Query Conservation         

 
           
  
   

             .     



            
 




 
     
Alig confidence 











































.


































Template Conservation   
     


            
  
   

 
  

        
    



            
 




 
     
Template Sequence  LEEGCRLGPIVSEAQYKKVLNCISSAKSEGATILTGGRRPEHLKKGYFVEPTIITDVTTSMQIWREEVFGPVLAVKTFST
Template Known Secondary structure  TSTT

B


S
TT


S

TTT
SSS



S

TTSS


SSSS
Template Predicted Secondary structure 








































Template SS confidence 















































































   327..330.........340.........350.........360.........370.........380.........390.........400......
 
   392.......400.........410.........420.........430.........440.........450.........460.........470.
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  EEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVM
Query Conservation    


   
    

 
 
 
 
   
      
  
 
 

         



   

 
   
   
   
  
 
 
Alig confidence 















































































Template Conservation    


   
    

  

 
 
   
      
  
 
 

         



   

 
   
   
      
 
 
Template Sequence  EEEAINLANDTHYGLGSAVMSNDLERCERLSKALQAGIVWINCAQPSFIQAPWGGIKRSGFGRELGEWGLENYLSVKQVT
Template Known Secondary structure  T
SS

S


S
S
SS

S





TTS
B


GGG

BSTT
Template Predicted Secondary structure 







































Template SS confidence 















































































   407..410.........420.........430.........440.........450.........460.........470.........480......
 
   472..
Predicted Secondary structure 
Query SS confidence 


Query Sequence  VKH
Query Conservation 
  
Alig confidence 


Template Conservation     
Template Sequence  RYT
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 


   487..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions