Job Description P77674 Confidence 100.00% Date Thu Jan 5 12:31:36 GMT 2012 Rank 2 Aligned Residues 473 % Identity 39% Template c3ed6B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:betaine aldehyde dehydrogenase; PDBTitle: 1.7 angstrom resolution crystal structure of betaine aldehyde2 dehydrogenase (betb) from staphylococcus aureus Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																.																																									.	.
Query SS confidence																.																																									.	.
Query Sequence		M	Q	H	K	L	L	I	N	G	E	L	V	S	G	.	E	G	E	K	Q	P	V	Y	N	P	A	T	G	D	V	L	L	E	I	A	E	A	S	A	E	Q	V	D	A	A	V	R	A	A	D	A	A	F	A	E	.	.	W	G	Q	T	T	P	K	V	R	A	E	C	L	L	K	L	A	D	V	I	E	E	N
Query Conservation																.																																									.	.
Alig confidence																.																																									.	.
Template Conservation
Template Sequence		L	S	Q	R	Q	Y	I	D	G	E	W	V	E	S	A	N	K	N	T	R	D	I	I	N	P	Y	N	Q	E	V	I	F	T	V	S	E	G	T	K	E	D	A	E	R	A	I	L	A	A	R	R	A	F	E	S	G	E	W	S	Q	E	T	A	E	T	R	G	K	K	V	R	A	I	A	D	K	I	K	E	H
Template Known Secondary structure					S				T	T						T	T									T	T	T	T																												T	T	T	T	T	S																			T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	V	F	A	E	L	E	S	R	N	C	G	K	P	L	H	S	A	F	N	D	E	I	P	A	I	V	D	V	F	R	F	F	A	G	A	A	R	C	L	N	G	L	A	A	G	E	Y	L	E	G	H	T	S	M	I	R	R	D	P	L	G	V	V	A	S	I	A	P	W	N	Y	P	L	M	M	A	A	W
Query Conservation
Alig confidence																							.
Template Conservation																							.
Template Sequence		R	E	A	L	A	R	L	E	T	L	D	T	G	K	T	L	E	E	S	Y	A	.	D	M	D	D	I	H	N	V	F	M	Y	F	A	G	L	A	D	K	D	G	G	E	M	I	D	S	P	I	P	D	T	E	S	K	I	V	K	E	P	V	G	V	V	T	Q	I	T	P	W	N	Y	P	L	L	Q	A	S	W
Template Known Secondary structure																							.																T	T	S									S	S	T	T																			S	S	S
Template Predicted Secondary structure																							.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		K	L	A	P	A	L	A	A	G	N	C	V	V	L	K	P	S	E	I	T	P	L	T	A	L	K	L	A	E	L	A	K	D	.	I	F	P	A	G	V	I	N	I	L	F	G	R	G	K	T	V	G	D	P	L	T	G	H	P	K	V	R	M	V	S	L	T	G	S	I	A	T	G	E	H	I	I	S	H	T
Query Conservation																																			.
Alig confidence																																			.
Template Conservation
Template Sequence		K	I	A	P	A	L	A	T	G	C	S	L	V	M	K	P	S	E	I	T	P	L	T	T	I	R	V	F	E	L	M	E	E	V	G	F	P	K	G	T	I	N	L	I	L	G	A	G	S	E	V	G	D	V	M	S	G	H	K	E	V	D	L	V	S	F	T	G	G	I	E	T	G	K	H	I	M	K	N	A
Template Known Secondary structure										T									T	T																			T	T	S						S			T	T									T	T		S						S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	S	I	K	R	T	H	M	E	L	G	G	K	A	P	V	I	V	F	D	D	A	D	I	E	A	V	V	E	G	V	R	T	F	G	Y	Y	N	A	G	Q	D	C	T	A	A	C	R	I	Y	A	Q	K	G	I	Y	D	T	L	V	E	K	L	G	A	A	V	A	T	L	K	S	G	A	P	D	D	E	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	N	N	V	T	N	I	A	L	E	L	G	G	K	N	P	N	I	I	F	D	D	A	D	F	E	L	A	V	D	Q	A	L	N	G	G	Y	F	H	A	G	Q	V	C	S	A	G	S	R	I	L	V	Q	N	S	I	K	D	K	F	E	Q	A	L	I	D	R	V	K	K	I	K	L	G	N	G	F	D	A	D
Template Known Secondary structure			T	T	T																	T	T	S															G	G	G	G	T	S	T	T																								T	T			B			T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.				.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure																																									.	.	.
Query SS confidence																																									.	.	.
Query Sequence		T	E	L	G	P	L	S	S	L	A	H	L	E	R	V	G	K	A	V	E	E	A	K	A	T	G	H	I	K	V	I	T	G	G	E	K	R	K	G	.	.	.	N	G	Y	Y	Y	A	P	T	L	L	A	G	A	L	Q	D	D	A	I	V	Q	K	E	V	F	G	P	V	V	S	V	T	P	F	D	N	E	E
Query Conservation																																									.	.	.
Alig confidence																																									.	.	.
Template Conservation
Template Sequence		T	E	M	G	P	V	I	S	T	E	H	R	N	K	I	E	S	Y	M	D	V	A	K	A	E	G	A	T	I	A	V	G	G	K	R	P	D	R	D	D	L	K	D	G	L	F	F	E	P	T	V	I	T	N	C	D	T	S	M	R	I	V	Q	E	E	V	F	G	P	V	V	T	V	E	G	F	E	T	E	Q
Template Known Secondary structure			S	B				S																			T								S					T	T	T	T	T	S										S			T	T	S					S				S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	V	N	W	A	N	D	S	Q	Y	G	L	A	S	S	V	W	T	K	D	V	G	R	A	H	R	V	S	A	R	L	Q	Y	G	C	T	W	V	N	T	H	F	M	L	V	S	E	M	P	H	G	G	Q	K	L	S	G	Y	G	K	D	M	S	L	Y	G	L	E	D	Y	T	V	V	R	H	V	M	V	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	I	Q	L	A	N	D	S	I	Y	G	L	A	G	A	V	F	S	K	D	I	G	K	A	Q	R	V	A	N	K	L	K	L	G	T	V	W	I	N	D	F	H	P	Y	F	A	Q	A	P	W	G	G	Y	K	Q	S	G	I	G	R	E	L	G	K	E	G	L	E	E	Y	L	V	S	K	H	I	L	T	N
Template Known Secondary structure								T		S	S			S							S												S			S					S		S					T	T	S		B			S	G	G	G			S		B	S							T	T
Template Predicted Secondary structure
Template SS confidence
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
		474
Predicted Secondary structure
Query SS confidence
Query Sequence		H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		486