Job Description P77674 Confidence 100.00% Date Thu Jan 5 12:31:36 GMT 2012 Rank 12 Aligned Residues 471 % Identity 36% Template c2d4eB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:5-carboxymethyl-2-hydroxymuconate semialdehyde PDBTitle: crystal structure of the hpcc from thermus thermophilus hb8 Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		Q	H	K	L	L	I	N	G	E	L	V	S	G	.	E	G	E	K	Q	P	V	Y	N	P	A	T	G	D	V	L	L	E	I	A	E	A	S	A	E	Q	V	D	A	A	V	R	A	A	D	A	A	F	A	E	W	G	Q	T	T	P	K	V	R	A	E	C	L	L	K	L	A	D	V	I	E	E	N	G	Q	V
Query Conservation															.
Alig confidence															.
Template Conservation
Template Sequence		P	A	L	H	F	I	A	G	E	F	V	P	S	E	S	G	E	T	F	P	S	L	D	P	A	T	N	E	V	L	G	V	A	A	R	G	G	E	R	E	V	D	R	A	A	K	A	A	H	E	A	F	Q	R	W	S	R	T	K	A	K	E	R	K	R	Y	L	L	R	I	A	E	L	I	E	K	H	A	D	E
Template Known Secondary structure			B					T	T						T	T									T	T	T	T																															S																			T
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	E	L	E	S	R	N	C	G	K	P	L	H	S	A	F	N	D	E	I	P	A	I	V	D	V	F	R	F	F	A	G	A	A	R	C	L	N	G	L	A	A	G	E	Y	L	E	G	H	T	S	M	I	R	R	D	P	L	G	V	V	A	S	I	A	P	W	N	Y	P	L	M	M	A	A	W	K	L	A
Query Conservation
Alig confidence																				.
Template Conservation																				.
Template Sequence		L	A	V	M	E	C	L	D	A	G	Q	V	L	R	I	V	R	A	.	Q	V	A	R	A	A	E	N	F	A	F	Y	A	E	Y	A	E	H	A	M	E	D	R	T	F	P	V	D	R	D	W	L	Y	Y	T	V	R	V	P	A	G	P	V	G	I	I	T	P	W	N	A	P	L	M	L	S	T	W	R	I	A
Template Known Secondary structure																				.														T	T	G	G	G	T	T								T	T	T																			S	S	S
Template Predicted Secondary structure																				.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		P	A	L	A	A	G	N	C	V	V	L	K	P	S	E	I	T	P	L	T	A	L	K	L	A	E	L	A	K	D	.	I	F	P	A	G	V	I	N	I	L	F	G	R	G	K	T	V	G	D	P	L	T	G	H	P	K	V	R	M	V	S	L	T	G	S	I	A	T	G	E	H	I	I	S	H	T	A	S	S
Query Conservation																																.
Alig confidence																																.
Template Conservation
Template Sequence		P	A	L	A	F	G	N	T	V	V	L	K	P	A	E	W	S	P	F	T	A	T	K	L	A	E	I	L	K	E	A	D	L	P	P	G	V	F	N	L	V	Q	G	F	G	E	E	A	G	A	A	L	V	A	H	P	L	V	P	L	L	T	L	T	G	E	T	E	T	G	K	I	V	M	R	N	A	A	D	H
Template Known Secondary structure						T	T									T	T	S														T	T			T	T	S								T	T	T									T	T								S													G	G	G
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	R	T	H	M	E	L	G	G	K	A	P	V	I	V	F	D	D	A	D	I	E	A	V	V	E	G	V	R	T	F	G	Y	Y	N	A	G	Q	D	C	T	A	A	C	R	I	Y	A	Q	K	G	I	Y	D	T	L	V	E	K	L	G	A	A	V	A	T	L	K	S	G	A	P	D	D	E	S	T	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	R	L	S	P	E	L	G	G	K	S	P	A	L	V	F	A	D	A	D	L	E	R	A	L	D	A	V	V	F	Q	I	F	S	F	N	G	E	R	C	T	A	S	S	R	L	L	V	E	E	K	I	F	E	D	F	V	G	K	V	V	E	R	A	R	A	I	R	V	G	H	P	L	D	P	E	T	E	V
Template Known Secondary structure		T																	T	T	S															G	G	G	G		S	T	T																									T			B			T	T	S	T	T		S	B
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.								.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.
Query Sequence		G	P	L	S	S	L	A	H	L	E	R	V	G	K	A	V	E	E	A	K	A	T	G	H	I	K	V	I	T	G	G	E	K	R	K	.	.	.	.	.	.	.	G	N	G	Y	Y	Y	A	P	T	L	L	A	G	A	L	Q	D	D	A	I	V	Q	K	E	V	F	G	P	V	V	S	V	T	P	F	D	N	E
Query Conservation																																					.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.																.
Template Conservation																																																											.
Template Sequence		G	P	L	I	H	P	E	H	L	Q	R	V	L	G	Y	V	E	A	G	K	R	E	G	A	R	L	L	V	G	G	E	R	A	K	T	S	F	R	G	E	D	L	S	R	G	N	Y	L	L	P	T	V	F	V	G	E	N	.	H	M	K	I	A	Q	E	E	I	F	G	P	V	L	V	A	I	P	F	K	D	E
Template Known Secondary structure					S																		T	T								S	B			B		T	T	S		B		T	T	T	T		B									T	.	T	S					S				S	S								S	S
Template Predicted Secondary structure																																																											.
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.		.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	V	V	N	W	A	N	D	S	Q	Y	G	L	A	S	S	V	W	T	K	D	V	G	R	A	H	R	V	S	A	R	L	Q	Y	G	C	T	W	V	N	T	H	F	M	L	V	S	E	M	P	H	G	G	Q	K	L	S	G	Y	G	K	D	M	S	L	Y	G	L	E	D	Y	T	V	V	R	H	V	M	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	A	L	R	K	A	N	D	T	K	Y	G	L	A	A	Y	V	F	T	R	D	L	E	R	A	H	R	L	A	L	E	L	E	A	G	M	V	Y	L	N	S	H	N	V	R	H	L	P	T	P	F	G	G	V	K	G	S	G	D	R	R	E	G	G	T	Y	A	L	D	F	Y	T	D	L	K	T	I	A	L
Template Known Secondary structure											S	S			S																			S		S	S					S	S	S					T	T	S		B			S	G	G	G	B		S		B	S
Template Predicted Secondary structure
Template SS confidence
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.
		473	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	L
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		504	.