 |
Job Description | P77674 | Confidence | 12.13% | Date | Thu Jan 5 12:31:36 GMT 2012 |
Rank | 67 | Aligned Residues | 40 |
% Identity | 10% | Template | c2co9A_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:thymus high mobility group box protein tox; |
PDBTitle: solution structure of the hmg_box domain of thymus high2 mobility group box protein tox from mouse
|
Resolution | UNK |
|
  |   |
44 | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | V | R | A | A | D | A | A | F | A | E | W | G | Q | T | T | P | K | V | R | A | E | C | L | L | K | L | A | D | V | I | E | E | N | G | Q | V | F | A | E |
Query Conservation |   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|   |   |   |   |   |
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
Template Sequence |   |
F | G | E | V | S | K | I | V | A | S | M | W | D | G | L | G | E | E | Q | K | Q | V | Y | K | K | K | T | E | A | A | K | K | E | Y | L | K | Q | L | A | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
45 | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|