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Job DescriptionP77674
Confidence100.00%DateThu Jan 5 12:31:36 GMT 2012
Rank46Aligned Residues362
% Identity17%Templatec1vluB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:gamma-glutamyl phosphate reductase; PDBTitle: crystal structure of gamma-glutamyl phosphate reductase (yor323c) from2 saccharomyces cerevisiae at 2.40 a resolution
Resolution2.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   40.........50.........60.........70.........80.........90...... ...100.......
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Query Sequence  QVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSA. . . . . . . . . . . . FNDEIPAIVDV
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Template Sequence  SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVXLQG
Template Known Secondary structure  TTS
TS


STT
TTSTT
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   108.110.........120. ........130.........140.........150.........160.........170.........180......
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Query Sequence  FRFFAGAARCLNGL. AAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAE
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Template Sequence  IKDVAELEDPVGKVKXARELDDGLTLYQVTAPVGVLLVIFESRPEV. . IANITALSIKSGNAAILKGGKESVNTFREXAK
Template Known Secondary structure  S

SSS
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GGG..TTTT

GGG
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   83......90.........100.........110.........120........ .130.........140.........150.........160
 
   187..190 .........200.........210.........220.........230.........240.........250.......
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Query Sequence  LAKD. . . . . . . . . IFPAGVINILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFD
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Template Sequence  IVNDTIAQFQSETGVPVGSVQLIETD. . . VSDLLDQDEYIDLVVPRGSNALVRKIKDTTK. . . IPVLGHADGICSIYLDE
Template Known Secondary structure  T


TTS



...TT
TTT

S
T
S...S
BTT

S

T
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   161........170.........180...... ...190.........200.........210....... ..220.........230....
 
   258.260.........270.........280.........290.........300.........310.........320.........330.......
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Query Sequence  DADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEE
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Template Sequence  DADLIKAKRISLDAKTNNAXETL. . . . . . LINPKFSKWW. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EVLENL
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   237..240.........250......... 260......... 270.....
 
   338.340.........350.........360.........370.........380.........390.........400.........410.......
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Query Sequence  AKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGR
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Template Sequence  TLEGGVTIHATKD. . . LKTAYFDKLNELGKLTEAIQCKTVDADSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKAN
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...T


TT





STTS
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   281........290... ......300.........310.........320.........330.........340.........350.......
 
   418.420.........430.........440.........450.........460.........470.
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Query Sequence  AHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVM
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Template Sequence  AEKFXKGVDSSGVYWNASTRFADG. . . . . . . . . . . . . . . . . . GLDGLVSYQYQI
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   368.370.........380.........390. ........400...
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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