 |
Job Description | P0AC05 | Confidence | 4.89% | Date | Thu Jan 5 11:16:50 GMT 2012 |
Rank | 37 | Aligned Residues | 41 |
% Identity | 24% | Template | c2owyB_ |
PDB info |
PDB header:dna binding protein | Chain: B: PDB Molecule:recombination-associated protein rdgc; |
PDBTitle: the recombination-associated protein rdgc adopts a novel toroidal2 architecture for dna binding
|
Resolution | 2.50 Å |
|
  |   |
62 | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | S | F | T | R | I | I | I | V | F | G | L | L | R | N | A | L | G | T | P | S | A | P | P | N | Q | V | L | L | G | L | A | L | F | L | T | F | F | I | M | S |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |
|
|
|   |
|
|   |
|
|
|   |
|
|   |
|
|
|
|
|
|
|   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |
|
|   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|   |   |
Template Sequence |   |
A | S | A | K | K | A | E | D | L | L | S | T | L | R | E | A | L | G | S | L | P | V | R | P | L | S | V | K | V | A | P | T | A | T | L | T | D | W | V | K | T |
Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | S |
|
|
|  |  |  |
|
| B | S | S |
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
142 | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|