Job Description P69797 Confidence 29.74% Date Thu Jan 5 12:12:00 GMT 2012 Rank 66 Aligned Residues 80 % Identity 9% Template c3sajB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:glutamate receptor 1; PDBTitle: crystal structure of glutamate receptor glua1 amino terminal domain Resolution 2.50 Å

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		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.						.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																																																	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.
Query Sequence		Q	V	A	T	R	W	T	K	E	T	N	V	S	R	I	I	V	V	S	D	E	V	A	A	D	T	V	R	K	T	L	L	T	Q	V	A	P	P	G	V	T	A	H	V	V	D	V	.	.	.	.	.	A	K	M	I	R	V	Y	N	N	P	K	Y	A	G	E	R	V	M	L	L	F	T	N	P	T	D	V	E
Query Conservation																																																	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.
Template Conservation
Template Sequence		E	A	L	I	S	I	I	D	H	Y	K	W	Q	T	F	V	Y	I	Y	D	A	D	R	G	L	S	V	L	Q	R	V	L	D	T	A	A	E	K	N	W	Q	V	T	A	V	N	I	L	T	T	T	E	E	G	Y	R	M	L	F	Q	D	L	E	K	K	K	E	R	L	V	V	V	D	C	E	S	E	R	L	N
Template Known Secondary structure												T														T	T													T								T	T	T																S	S	S
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		252	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	V	E	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	L	G	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions