|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | I | A | I | V | I | G | T | H | G | W | A | A | E | Q | L | L | K | T | A | E | M | L | L | G | E | Q | E | N | V | G | W | I | D | F | V | P | G | E | N | A | E | T | L | I | E | K | Y | N | A | Q | L | A | K | . |
L | D | T | T | K | G | V | L | F | L | V | D | T | W | G | G | S | P | F | N | A | A | S | R | I |
Query Conservation |   |
  |
|   |
|
|
|   |
|
|
|   |   |
|   |
|
|   |   |
|   |   |
|
|   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   | . |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|
|
|
|   |
|   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|   |
|
|
|   |   |
|   |
|
|   |   |
|   |   |   |
|   |
|   |   |   |   |
|   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|
|
|
|   |
|   |
|   |   |   |
Template Sequence |   |
E | K | F | V | L | I | I | T | H | G | D | F | G | K | G | L | L | S | G | A | E | V | I | I | G | K | Q | E | N | V | H | T | V | G | L | N | L | G | D | N | I | E | V | V | R | K | E | V | E | K | I | I | K | E | K | L | Q | E | D | K | E | I | I | I | V | V | D | L | F | G | G | S | P | F | N | I | A | L | S | M |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| S | S |  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | S | S | S | S | S |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
  |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | V | D | K | E | H | Y | E | V | I | A | G | V | N | I | P | M | L | V | E | T | L | M | A | R | D | D | D | P | S | F | D | E | L | V | A | L | A | V | E | T | G | R | E | G | V | K | A | L | K | A |
Query Conservation |   |
  |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |
|
|
|   |
|
|   |
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   | . |   |   |   |
|
|
|
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |   | . |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
Template Sequence |   |
M | K | E | Y | . |
D | V | K | V | I | T | G | I | N | M | P | M | L | V | E | L | L | T | S | I | N | V | . |
Y | D | T | T | E | L | L | E | N | I | S | K | I | G | K | D | G | I | K | V | I | E | K |
Template Known Secondary structure |   |
 | T | T | S | . |
|  |  |  |  |
| S |
|
|  |  |  |  |  |  |  |  |  | S | T | T | T | . | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|
|
|
|
Template Predicted Secondary structure |   |
 |
|
|
| . |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
83 | . | . | . | |
. | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | |
. | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . |
  |