Job Description P69797 Confidence 99.35% Date Thu Jan 5 12:12:00 GMT 2012 Rank 14 Aligned Residues 126 % Identity 19% Template c3gdwA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:sigma-54 interaction domain protein; PDBTitle: crystal structure of sigma-54 interaction domain protein from2 enterococcus faecalis Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure												.																																											.	.
Query SS confidence												.																																											.	.
Query Sequence		T	I	A	I	V	I	G	T	H	G	.	W	A	A	E	Q	L	L	K	T	A	E	M	L	L	G	E	Q	E	N	V	G	W	I	D	F	V	P	G	E	N	A	E	T	L	I	E	K	Y	N	A	Q	L	.	.	A	K	L	D	T	T	K	G	V	L	F	L	V	D	T	W	G	G	S	P	F	N	A	A	S
Query Conservation												.																																											.	.
Alig confidence												.																	.																										.	.																.	.
Template Conservation																													.																																											.	.
Template Sequence		N	V	G	V	F	V	L	X	H	G	D	S	T	A	S	S	X	L	K	T	A	Q	E	L	L	G	T	.	S	I	G	T	A	X	N	X	P	L	T	X	E	V	Q	T	X	Y	E	Q	L	R	N	Q	V	I	T	Q	K	E	S	L	N	N	G	I	L	L	L	T	D	X	.	.	G	S	L	N	S	F	G	N
Template Known Secondary structure											S	S	S														T		.										T	T	S															T	S	T	G	G	G	T	T								S	.	.	G	G	G	G	G
Template Predicted Secondary structure																													.																																											.	.
Template SS confidence
		544	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570		.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.			.	.	.	.	.	.	.	620
		79	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130
Predicted Secondary structure									.																																											.
Query SS confidence									.																																											.
Query Sequence		R	I	V	V	D	K	E	.	H	Y	E	V	I	A	G	V	N	I	P	M	L	V	E	T	L	M	A	R	D	D	D	P	S	F	D	E	L	V	A	L	A	V	E	T	G	R	E	G	V	K	.	A	L	K
Query Conservation									.																																											.
Alig confidence									.																																											.
Template Conservation
Template Sequence		X	L	F	E	E	T	G	I	R	T	K	A	I	T	X	T	S	T	X	I	V	L	E	A	I	R	X	A	S	V	G	R	S	L	E	D	I	Y	Q	N	I	Q	L	S	F	E	S	V	V	R	E	Q	F	R
Template Known Secondary structure																S															T	T																						T
Template Predicted Secondary structure
Template SS confidence
		621	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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