Job Description P69797 Confidence 39.88% Date Thu Jan 5 12:12:00 GMT 2012 Rank 48 Aligned Residues 118 % Identity 13% Template c3fysA_ PDB info PDB header:fatty acid-binding protein Chain: A: PDB Molecule:protein degv; PDBTitle: crystal structure of degv, a fatty acid binding protein2 from bacillus subtilis Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.					.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	T	I	A	I	V	I	G	T	H	G	W	A	A	E	Q	L	L	K	T	A	E	M	L	L	G	E	Q	.	.	.	.	E	N	V	G	W	I	D	F	V	P	G	E	N	A	E	T	L	I	E	K	Y	N	A	Q	L	A	K	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																														.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.								.																	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.																	.
Template Sequence		M	N	I	A	V	V	T	D	S	T	A	Y	I	P	K	E	M	R	E	Q	H	Q	I	H	M	I	P	L	Q	V	V	F	R	E	E	T	Y	R	E	.	E	I	E	L	D	W	K	S	F	Y	E	E	V	K	K	H	.	N	E	L	P	T	T	S	Q	P	P	I	G	E	L	V	A	L	Y	E	E	L	G	K
Template Known Secondary structure										G	G	G											T											S	S					B	.	T	T	T	B											T	T	.	T																					T	T
Template Predicted Secondary structure																																									.																	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.			.	.	.	90	.	.	.	.	.	.						.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																	.															.	.											.	.	.	.	.															.
Query SS confidence																	.															.	.											.	.	.	.	.															.
Query Sequence		T	T	K	G	V	L	F	L	V	D	T	W	G	G	S	.	P	F	N	A	A	S	R	I	V	V	D	K	E	H	.	.	Y	E	V	I	A	G	V	N	I	P	.	.	.	.	.	M	L	V	E	T	L	M	A	R	D	D	D	P	S	.	F	D	E	L	V	A	L	A	V	E
Query Conservation																	.															.	.											.	.	.	.	.															.
Alig confidence																	.															.	.											.	.	.	.	.															.
Template Conservation
Template Sequence		S	Y	D	A	V	I	S	I	H	L	S	S	G	I	S	G	T	F	S	S	A	A	A	A	D	S	M	V	D	N	I	D	V	Y	P	F	D	S	E	I	S	C	L	A	Q	G	F	Y	A	L	K	A	A	E	L	I	K	N	G	A	S	S	P	E	D	I	I	K	E	L	E	E
Template Known Secondary structure		T		S							S		T	T	T		S								G	G	G	G		S	S									S	S																		T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions