Job Description P69797 Confidence 23.40% Date Thu Jan 5 12:12:00 GMT 2012 Rank 83 Aligned Residues 82 % Identity 6% Template c2hqbA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional activator of comk gene; PDBTitle: crystal structure of a transcriptional activator of comk2 gene from bacillus halodurans Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	A	I	V	I	G	T	H	G	W	A	A	E	Q	L	L	K	T	A	E	M	L	L	G	E	Q	E	N	V	G	W	I	D	F	V	P	G	E	N	A	E	T	L	I	E	K	Y	N	A	Q	L	A	K	L	D	T	T	K	G	V	L	F	L	V	D	T	W	G	G	S	P	F	N	A	A	S	R	I	V
Query Conservation
Alig confidence												.																	.																											.	.								.	.	.	.
Template Conservation												.																	.																											.	.								.	.	.	.
Template Sequence		X	V	G	L	L	V	E	D	T	G	.	W	N	R	K	A	Y	E	G	L	L	N	I	H	S	N	L	.	D	V	D	V	V	L	E	E	G	V	N	S	E	Q	K	A	H	R	R	I	K	E	L	V	D	G	.	.	G	V	N	L	I	F	G	.	.	.	.	H	G	H	A	F	A	E	Y	F	S	T	I	H
Template Known Secondary structure												.		T														S	.												S														T	.	.	T							.	.	.	.		S	T								T	T	T
Template Predicted Secondary structure												.																	.																											.	.								.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.					60	.	.	.	.	.	.	.	.	.	70	.	.
		82	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	K	E	H	Y	E	V	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	Q	Y	P	D	V	H	F	V	S
Template Known Secondary structure		T	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions