Job Description P69797 Confidence 21.04% Date Thu Jan 5 12:12:00 GMT 2012 Rank 92 Aligned Residues 82 % Identity 18% Template c1dd9A_ PDB info PDB header:transferase Chain: A: PDB Molecule:dna primase; PDBTitle: structure of the dnag catalytic core Resolution 1.60 Å

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		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.				.	280	.	.	.												.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																																													.	.	.						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	E	R	V	M	L	L	F	T	N	P	T	D	V	E	R	L	V	E	G	G	V	K	I	T	S	V	N	V	G	G	M	A	F	R	Q	G	K	T	Q	V	N	.	.	.	N	A	V	S	V	.	.	.	.	.	.	.	.	.	.	.	D	E	K	D	I	E	A	F	K	K	L	N	A	R	G	I	E	L
Query Conservation																																													.	.	.						.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.																			.	.	.						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.
Template Sequence		A	E	P	N	R	L	L	V	V	E	G	Y	M	D	V	V	A	L	A	Q	Y	G	I	N	.	Y	A	V	A	S	L	G	S	T	T	A	D	H	I	Q	L	L	F	R	A	T	N	N	V	I	C	C	Y	D	G	D	R	A	G	R	D	A	A	W	R	A	L	E	T	A	L	P	Y	M	T	D	G	R	Q	L
Template Known Secondary structure		S	S		S						S	S										T	T			.																						S								S	S															G	G	G			T	T
Template Predicted Secondary structure																										.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	R	K	V	S	T	D	P	K	L	K	M	M	D	L	I	S	K
Query Conservation
Alig confidence											.	.
Template Conservation											.	.
Template Sequence		R	F	M	F	L	P	D	G	E	.	.	D	P	D	T	L	V	R	K
Template Known Secondary structure								T	T		.	.
Template Predicted Secondary structure											.	.
Template SS confidence
		336	.	.	.	340	.	.	.	.			.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions