 |
Job Description | P0AF54 | Confidence | 4.14% | Date | Thu Jan 5 11:25:15 GMT 2012 |
Rank | 38 | Aligned Residues | 43 |
% Identity | 19% | Template | c2kr6A_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:presenilin-1; |
PDBTitle: solution structure of presenilin-1 ctf subunit
|
Resolution | UNK |
|
  |   |
24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | F | A | T | I | L | S | I | I | M | L | A | V | Y | I | G | F | I | L | L | I | A | F | A | P | G | W | L | G | T | P | L | N | P | N | T | S | V | T | R | G | I | P | I | G | V | G |
Query Conservation |   |
|
|   |   |   |
|   |   |   |   |
|   |   |
|   |   |
|
|
|
|   |
|
|
|
|   |   |
|   |   |   |
|   |   |   |
|   |
|   |   |
|   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|
|
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |
|
|
|
|
|
|
|
| . | . | . | . |
|   |   |
|   |   |
|
|
|   |
Template Sequence |   |
T | T | I | A | C | F | V | A | I | L | I | G | L | C | L | T | L | L | L | L | A | I | F | K | K | A | L | P | A | L | P | I | S | . |
. |
. |
. |
I | T | F | G | L | V | F | Y | F | A |
Template Known Secondary structure |   |
T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |
| S | S | S | S | S |
| . | . | . | . |
|
|
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
406 | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | |
|
|
|
. | 440 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|