Job Description P76459 Confidence 84.12% Date Thu Jan 5 12:23:04 GMT 2012 Rank 47 Aligned Residues 156 % Identity 17% Template d3efba1 SCOP info NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like SorC sugar-binding domain-like Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.				.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.							.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																								.										.	.	.																														.	.	.	.	.	.
Query SS confidence																								.										.	.	.																														.	.	.	.	.	.
Query Sequence		Q	R	I	A	R	R	V	A	Q	E	L	R	D	G	D	I	V	N	L	G	I	G	.	L	P	T	M	V	A	N	Y	L	.	.	.	P	E	G	I	H	I	T	L	Q	S	E	N	G	F	L	G	L	G	P	V	T	T	A	H	P	D	L	V	N	.	.	.	.	.	.	A	G	G	Q	P	C	G	V	L	P
Query Conservation																								.										.	.	.																														.	.	.	.	.	.
Alig confidence																								.										.	.	.																														.	.	.	.	.	.
Template Conservation
Template Sequence		L	H	G	A	Q	L	L	D	R	L	L	E	P	G	D	I	V	G	F	S	W	G	R	A	V	S	A	L	V	E	N	L	P	Q	A	G	Q	S	R	Q	L	I	C	V	P	I	I	G	G	P	S	G	K	L	E	S	R	Y	H	V	N	T	L	T	Y	S	A	A	A	K	L	K	G	E	S	H	L	A	D	F
Template Known Secondary structure														T	T								S									T					S	S									S	B		B		T	T	S	S		G	G	G													T	T								S
Template Predicted Secondary structure
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90											.	.	.	.	.	.	.	.	.																										100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	A	A	M	F	D	S	A	M	S	F	A	L	I	R	G	.	.	.	.	.	.	.	.	.	.	G	H	I	D	A	C	V	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	Q	V	D	E	E	A	N	L	A	N	W	V	V	P	G	K	M	V
Query Conservation																		.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	A	L	L	D	N	P	L	I	R	N	G	I	X	Q	S	Q	H	F	K	T	I	S	A	Y	W	D	N	L	D	I	A	L	V	G	I	G	S	P	A	F	Y	G	G	E	E	S	D	D	L	N	A	R	Q	V	A	G	D	I	C	S	R	F	F	D	I	H	G	A	X	V	E	T	N	X	S	E	K	T	L
Template Known Secondary structure		B	S	B		S	S									T	S												T		S							B					S											T	T						T	T					T	T	S		B				T	T	G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	M	G	G	A	M	D	L	V	T	G	S	R	K	V	I	I	A	M	E	H	C	A	K	D	G	S	A	K	I	L	R	R	C	T	M	P	L	T	A	Q	H	A	V	H	M	L	V	T	E
Query Conservation
Alig confidence					.	.	.																																.	.	.	.	.	.	.
Template Conservation					.	.	.																																.	.	.	.	.	.	.
Template Sequence		S	I	E	.	.	.	X	N	K	L	K	Q	A	R	Y	S	I	G	I	A	X	S	E	E	K	Y	S	G	I	I	G	A	L	R	G	K	Y	.	.	.	.	.	.	.	I	N	C	L	V	T	N
Template Known Secondary structure		B			.	.	.						T	S	S									S		S	S									T	T	S	.	.	.	.	.	.	.		S
Template Predicted Secondary structure					.	.	.																																.	.	.	.	.	.	.
Template SS confidence
		216	.	.				.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.								250	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions