Job Description P76459 Confidence 98.05% Date Thu Jan 5 12:23:04 GMT 2012 Rank 33 Aligned Residues 145 % Identity 21% Template c3rrlC_ PDB info PDB header:transferase Chain: C: PDB Molecule:succinyl-coa:3-ketoacid-coenzyme a transferase subunit a; PDBTitle: complex structure of 3-oxoadipate coa-transferase subunit a and b from2 helicobacter pylori 26695 Resolution 2.29 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.					.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																					.	.	.	.										.	.																	.	.	.																				.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.										.	.																	.	.	.																				.	.	.	.	.	.	.	.
Query Sequence		A	R	R	V	A	Q	E	L	R	D	G	D	I	V	N	L	G	I	G	.	.	.	.	L	P	T	M	V	A	N	Y	L	.	.	P	E	G	I	H	I	T	L	Q	S	E	N	G	F	L	G	.	.	.	L	G	P	V	T	T	A	H	P	D	L	V	N	A	G	G	Q	P	C	.	.	.	.	.	.	.	.
Query Conservation																					.	.	.	.										.	.																	.	.	.																				.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.										.	.																	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	K	A	L	S	A	L	K	D	G	D	T	I	L	V	G	G	F	G	L	C	G	I	P	E	Y	A	I	D	Y	I	Y	K	K	G	I	K	D	L	I	V	V	S	N	N	C	G	V	D	D	F	G	L	G	I	L	L	E	K	K	Q	I	K	K	I	I	A	S	Y	V	G	E	N	K	I	F	X	L	N
Template Known Secondary structure							T	T			T	T								B	T	T	B	T													T			S						S				B	T	T	B	T	T					T	T	T								S			T	T		S				T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.																																					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	V	L	P	G	A	A	M	F	D	S	A	M	S	F	A	L	I	R	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	I	D	A	C	V	L	G	G	L	Q	V	D	E	E	A	N	L	A	N	W	V	V
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		G	E	I	E	V	V	L	T	P	Q	G	T	L	A	E	N	L	H	A	G	G	A	G	I	P	A	Y	Y	T	P	T	G	V	G	T	L	I	A	Q	G	K	E	S	R	E	F	N	G	K	E	Y	I	L	E	R	A	I	T	G	D	Y	G	L	I	K	A	Y	K	S	D	T	L	G	N	.	.	.	.	.	.
Template Known Secondary structure		S	S	S																				T							S	T	T	T	T	S	G	G	G	T	T	S						T	T																			S				T	T			.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.					.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.																																.	.	.	.
Query SS confidence													.	.																																.	.	.	.
Query Sequence		P	G	K	M	V	P	G	M	G	G	A	.	.	M	D	L	V	T	G	S	R	K	V	I	I	A	M	E	H	C	A	K	D	G	S	A	K	I	L	R	R	C	T	M	.	.	.	.	P	L	T	A	Q	H	A	V	H	M	L	V
Query Conservation													.	.																																.	.	.	.
Alig confidence		.	.										.	.																	.	.	.	.	.	.	.	.								.	.	.	.
Template Conservation		.	.																												.	.	.	.	.	.	.	.
Template Sequence		.	.	L	V	F	R	K	T	A	R	N	F	N	P	L	C	A	X	A	A	K	I	C	V	A	E	V	E	E	.	.	.	.	.	.	.	.	I	V	P	A	G	E	L	D	P	D	E	I	H	L	P	G	I	Y	V	Q	H	I	Y
Template Known Secondary structure		.	.					G	G	G		T	T							T									S		.	.	.	.	.	.	.	.				T	T	S	S		T	T	T		S	B		G	G	G		S
Template Predicted Secondary structure		.	.																												.	.	.	.	.	.	.	.
Template SS confidence
				165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.									.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions