Job Description P76459 Confidence 72.33% Date Thu Jan 5 12:23:04 GMT 2012 Rank 50 Aligned Residues 102 % Identity 16% Template c3kv1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional repressor; PDBTitle: crystal structure of putative sugar-binding domain of transcriptional2 repressor from vibrio fischeri Resolution 1.70 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																												.						.	.
Query SS confidence																												.						.	.
Query Sequence		Q	R	I	A	R	R	V	A	Q	E	L	R	D	G	D	I	V	N	L	G	I	G	L	P	T	M	.	V	A	N	Y	L	.	.	P	E	G	I	H	I	T	L	Q	S	E	N	G	F	L	G	L	G	P	V	T	T	A	H	P	D	L	V	N	A	G	G	Q	P	C	G	V	L	P	G	A	A	M	F	D	S
Query Conservation																												.						.	.
Alig confidence																												.						.	.
Template Conservation
Template Sequence		A	L	V	S	S	Y	L	N	N	N	L	Q	E	G	X	A	V	A	V	G	Q	G	Q	N	V	A	A	V	A	D	H	A	G	I	V	T	Q	R	N	A	R	F	V	S	A	I	G	G	T	H	I	I	N	A	D	H	I	C	R	R	L	A	K	K	Y	G	G	S	S	E	T	L	Y	A	P	A	Y	V	N	D
Template Known Secondary structure														T	T								S																							S	B		B																		T								S	B	S	B		S	S
Template Predicted Secondary structure
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.												.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	M	S	F	A	L	I	R	G	G	.	.	.	.	.	.	.	.	.	.	.	H	I	D	A	C	V	L	G	G	L	Q	V	D	E	E
Query Conservation												.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	S	L	R	S	A	F	X	E	H	A	T	I	K	E	T	L	S	Q	A	R	K	A	E	F	A	L	V	G	I	G	D	X	D	E	N
Template Known Secondary structure										T	S												T		S
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions