Return to main results Retrieve Phyre Job Id

Job DescriptionP76459
Confidence99.49%DateThu Jan 5 12:23:04 GMT 2012
Rank21Aligned Residues120
% Identity19%Templatec3hheA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:ribose-5-phosphate isomerase a; PDBTitle: crystal structure of ribose-5-phosphate isomerase a from bartonella2 henselae
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30 ........ .40.........50.........60.........70......
Predicted Secondary structure 








.

....






















Query SS confidence 




























.







. . . .





































Query Sequence  DAKQRIARRVAQELRDGDIVNLGIGLPTM. VANYLPEG. . . . IHITLQSENGFLGLGPVTTAHPDLVNAGGQPCGVLPGA
Query Conservation    
  

  

  
 

  
 

 


  . 
  
   ....  
 


 

                 

         
Alig confidence 




























.







....


















...................
Template Conservation 
 
  

  
   
 

  








  

  
         
 


 
  
       ...................
Template Sequence  QLKKMAALKALEFVEDDMRLGIGSGSTVNEFIPLLGERVANGLRVTCVATSQYSEQLCHKF. . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT

TT

STT

SST...................
Template Predicted Secondary structure 















...................
Template SS confidence 















































































   26...30.........40.........50.........60.........70.........80......
 
   77..80.........90.........100.........110.........120..... ....130.........140.........150..
Predicted Secondary structure 






















....









Query SS confidence 
















































. . . .


























Query Sequence  AMFDSAMSFALIRGGHIDACVLGGLQVDEEANLANWVVPGKMVPGMGGA. . . . MDLVTGSRKVIIAMEHCAKDGSAKILR
Query Conservation                   


 


  

  
 

        
 
 

 .... 
    
   

      
 
   

 
Alig confidence  ....




























.........






....
















......



Template Conservation  ....
           








 

    
.........


 
 

  




  
   




 
......
 
 
Template Sequence  . . . . GVPISTLEKIPELDLDIDGADEIGPEMTL. . . . . . . . . IKGGGGALLHEKIVASASRAMFVIADET. . . . . . KMVK
Template Known Secondary structure  ....T

B

TTT

SBS

S
GGG
.........

TTS
TBS
GG......GB
S
Template Predicted Secondary structure  ....



















.........




......
Template SS confidence 















































































   87..90.........100.........110..... ....120.........130.........140... ....
 
   153. .....
Predicted Secondary structure 

.


Query SS confidence 

.




Query Sequence  RC. TMPLT
Query Conservation    .     
Alig confidence 

.




Template Conservation   

  


Template Sequence  TLGAFALP
Template Known Secondary structure  SS
SS
Template Predicted Secondary structure 




Template SS confidence 







   148.150.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions