Job Description P76459 Confidence 99.25% Date Thu Jan 5 12:23:04 GMT 2012 Rank 28 Aligned Residues 120 % Identity 19% Template c2pjmA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:ribose-5-phosphate isomerase a; PDBTitle: structure of ribose 5-phosphate isomerase a from2 methanocaldococcus jannaschii Resolution 1.78 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.						.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																															.							.	.	.	.	.
Query SS confidence																															.							.	.	.	.	.
Query Sequence		D	A	K	Q	R	I	A	R	R	V	A	Q	E	L	R	D	G	D	I	V	N	L	G	I	G	L	P	T	M	.	V	A	N	Y	L	P	.	.	.	.	.	E	G	I	H	I	T	L	Q	S	E	N	G	F	L	G	L	G	P	V	T	T	A	H	P	D	L	V	N	A	G	G	Q	P	C	G	V	L	P	G
Query Conservation																															.							.	.	.	.	.
Alig confidence																															.							.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	K	L	K	V	A	K	E	A	V	K	L	V	K	D	G	M	V	I	G	L	G	T	G	S	T	A	A	L	F	I	R	E	L	G	N	R	I	R	E	E	E	L	T	V	F	G	I	P	T	S	F	E	A	K	M	L	A	M	Q	Y	E	I	P	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												G	G	G			T	T								S																		T								S	S										T	T			B		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.					.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																																				.	.	.	.
Query SS confidence																																																				.	.	.	.
Query Sequence		A	A	M	F	D	S	A	M	S	F	A	L	I	R	G	G	H	I	D	A	C	V	L	G	G	L	Q	V	D	E	E	A	N	L	A	N	W	V	V	P	G	K	M	V	P	G	M	G	G	A	.	.	.	.	M	D	L	V	T	G	S	R	K	V	I	I	A	M	E	H	C	A	K	D	G	S	A	K	I	L
Query Conservation																																																				.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.										.	.	.	.																	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	T	L	D	E	Y	D	V	D	I	A	F	D	G	A	D	E	V	E	E	T	T	L	.	.	.	.	.	.	.	.	F	L	I	K	G	G	G	G	C	H	T	Q	E	K	I	V	D	Y	N	A	N	E	F	V	V	L	V	D	E	.	.	.	.	.	.	S	K	L	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.		T	T	T				S							S				T	T	T		.	.	.	.	.	.	.	.						T	T	S												S	S								G	.	.	.	.	.	.	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Template SS confidence
													72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.									.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.							.	.	.	.
		152	.	.			.	.	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		R	R	C	.	.	T	M	P	L	T
Query Conservation					.	.
Alig confidence					.	.
Template Conservation
Template Sequence		K	K	L	G	E	K	F	P	I	P
Template Known Secondary structure		S	S	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		127	.	.	130	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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