 |
Job Description | P76459 | Confidence | 19.98% | Date | Thu Jan 5 12:23:04 GMT 2012 |
Rank | 67 | Aligned Residues | 68 |
% Identity | 21% | Template | c1ydmC_ |
PDB info |
PDB header:structural genomics, unknown function | Chain: C: PDB Molecule:hypothetical protein yqgn; |
PDBTitle: x-ray structure of northeast structural genomics target sr44
|
Resolution | 2.50 Å |
|
 |
  |   |
92 | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | |
. | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|  |  | . |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | I | D | A | C | V | L | G | G | L | Q | V | D | E | E | A | N | L | A | N | W | V | V | P | G | K | M | V | P | G | M | G | G | A | M | D | . |
L | V | T | G | S | R | K | V | I | I | A | M | E | H | C | A | K | D | G | S | A | K | I | L | R | R | C | T | M | P | L | T | A | Q | H | A | V | H | M | L | V | T | E |
Query Conservation |   |
  |   |
|
|
|   |
|
|
|   |   |
|
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |   |
| . |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |
|   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|   |
|
|
|
|   |   |
|   | . | . | . | . | . | . | . | . | . |
|
|
|   |
|   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |
|
|
|   |   |   | . | . | . | . | . |   |
|   |   |   |   |
|
|   |
| . |   |
|
|   |   |
|
|   |
|
|
|
|
Template Sequence |   |
Q | I | D | L | X | I | V | P | G | V | C | F | D | V | N | G | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
R | V | G | F | G | G | G | Y | Y | D | R | Y | L | S | E | Y | E | G | K | T | V | S | L | L | L | E | . |
. |
. |
. |
. |
C | Q | L | F | A | H | V | P | R | L | . |
P | H | D | I | P | V | H | K | L | I | T | E |
Template Known Secondary structure |   |
G |
| S |  |  |  |  |
|
| S |  |  |  | T | T | S |
| . | . | . | . | . | . | . | . | . |  |  |
| S | S | T | T |  |  |  |  |  |  |  |  |
|
| S |
|
|  |  |  |
|
| G | . | . | . | . | . | G | G |  |  | S |
|
|
|
|
| . | S | S |
|
|
|
| S |  |  |  |
| S |
Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
115 | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 160 | . | . | . | . | . | . | . | |
. | . | 170 | . | . | . | . | . | . | . | . | . |
  |
  |   |
171 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
L | A | V | F |
Query Conservation |   |
  |
|
|   |
Alig confidence |   |
|
|
|
|
Template Conservation |   |
  |   |
|   |
Template Sequence |   |
D | R | I | I |
Template Known Secondary structure |   |
S |
|
|
|
Template Predicted Secondary structure |   |
|
|  |  |
Template SS confidence |   |
|
|
|
|
  |   |
180 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|