Return to main results Retrieve Phyre Job Id

Job DescriptionP09373
Confidence10.26%DateThu Jan 5 11:02:15 GMT 2012
Rank87Aligned Residues43
% Identity16%Templated1eika_
SCOP infoRPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   297..300.........310.........320.........330.........
Predicted Secondary structure 























Query SS confidence 










































Query Sequence  ITEQEAQEMVDHLVMKLRMVRFLRTPEYDELFSGDPIWATESI
Query Conservation 

 


 





 

       
         
 
  
 


Alig confidence 










































Template Conservation 

 

   

  
 
   


 
   



 
 
 
 





Template Sequence  LNESEAKRVLKELDAHPEQLPKIKTTDPVAKAIGAKRGDIVKI
Template Known Secondary structure 
TT

TTTS


BTTSGGG

TT
Template Predicted Secondary structure 

















Template SS confidence 










































   17..20.........30.........40.........50.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions