Job Description P11350 Confidence 2.48% Date Thu Jan 5 11:32:36 GMT 2012 Rank 39 Aligned Residues 96 % Identity 8% Template d2gica1 SCOP info Rhabdovirus nucleoprotein-like Rhabdovirus nucleoprotein-like Rhabdovirus nucleocapsid protein Resolution 2.92

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120							.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140															.	.	.	.	.	.	.	.			.	150	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.														.								.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Query SS confidence																									.	.	.	.	.	.														.								.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Query Sequence		G	V	L	C	L	I	G	G	V	L	L	L	K	R	R	L	F	S	P	R	V	R	A	.	.	.	.	.	.	T	T	T	G	A	D	I	L	I	L	S	L	L	.	V	I	Q	C	A	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	T	I	P	F	S	A	.	.	Q	H	M	D	G	S
Query Conservation																									.	.	.	.	.	.														.								.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Alig confidence																									.	.	.	.	.	.														.								.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Conservation
Template Sequence		N	Y	T	K	I	V	A	A	V	D	M	F	F	H	M	F	K	K	H	E	C	A	S	F	R	Y	G	T	I	V	S	R	F	K	D	C	A	A	L	A	T	F	G	H	L	C	K	I	T	G	M	S	T	E	D	V	T	T	W	I	L	N	R	E	V	A	D	E	M	V	Q	M	M	L	P	G	Q	E	I	D
Template Known Secondary structure																		T	T	S	T	T	G	G	G					G	G	G	T	T	T	T															T									T			S											T		S	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	M	K	L	V	G	W	A	Q	S	V	V	T	F	H	G	G	A	S	Q	H	L	D	G	V	A	F	I	F	R	L	H	L	V	L	G	M	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	D	S	Y	M	P	Y	L	I	D	F	G	L	S	S	K	S	P	Y	S	S	V	K	N	P	A	F	H	F	W	G	Q	L	T	A	L	L	L
Template Known Secondary structure			T	T		S	G	G	G	T	T	T	T	T	S		S	S		T	T	S	S	T	T															T
Template Predicted Secondary structure
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions