Return to main results Retrieve Phyre Job Id

Job DescriptionP11350
Confidence5.71%DateThu Jan 5 11:32:36 GMT 2012
Rank14Aligned Residues20
% Identity25%Templatec3rkoA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:nadh-quinone oxidoreductase subunit a; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30......
Predicted Secondary structure 


Query SS confidence 



















Query Sequence  GAVFLIGSWLRYDYGQYTWR
Query Conservation 



  
   
         
Alig confidence 



















Template Conservation 
 

  

 


 



 
 
Template Sequence  IFVLLAGLVYLVRIGALDWT
Template Known Secondary structure  TSSS

Template Predicted Secondary structure 





Template SS confidence 



















   107..110.........120......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions