Return to main results Retrieve Phyre Job Id

Job DescriptionP11350
Confidence5.66%DateThu Jan 5 11:32:36 GMT 2012
Rank15Aligned Residues25
% Identity28%Templatec2ww9B_
PDB info PDB header:ribosomeChain: B: PDB Molecule:protein transport protein sss1; PDBTitle: cryo-em structure of the active yeast ssh1 complex bound to the2 yeast 80s ribosome
Resolution8.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   187..190.........200. ........210....
Predicted Secondary structure  .
Query SS confidence 














.












Query Sequence  HLVLGMTLFLLFPFS. RLIHIWSVPVEYL
Query Conservation 
  
   

   


.

 
    
  

Alig confidence 














.




...




Template Conservation 
  


 


 


 





...




Template Sequence  AVGIGFIAVGIIGYAIKLIHI. . . PIRYV
Template Known Secondary structure  ...
Template Predicted Secondary structure  ...
Template SS confidence 




























   53......60.........70... .....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions