 |
Job Description | P11350 | Confidence | 2.49% | Date | Thu Jan 5 11:32:36 GMT 2012 |
Rank | 38 | Aligned Residues | 39 |
% Identity | 10% | Template | c1zzaA_ |
PDB info |
PDB header:membrane protein | Chain: A: PDB Molecule:stannin; |
PDBTitle: solution nmr structure of the membrane protein stannin
|
Resolution | UNK |
|
  |   |
1 | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | Q | F | L | N | . |
. |
. |
. |
. |
. |
. |
. |
M | F | F | F | D | I | Y | P | Y | I | A | G | A | V | F | L | I | G | S | W | L | R | Y | D | Y | G | Q | Y | T | W | R | A | A | S |
Query Conservation |   |
|   |   |   |   | . | . | . | . | . | . | . | . |   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
M | S | I | M | D | H | S | P | T | T | G | V | V | T | V | I | V | I | L | I | A | I | A | A | L | G | A | L | I | L | G | C | W | C | Y | L | R | L | Q | R | I | S | Q | S | E | D | E |
Template Known Secondary structure |   |
| S | S |
| T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S | S |
| S | S |
| S | S |
|
|
|
Template Predicted Secondary structure |   |
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|