Return to main results Retrieve Phyre Job Id

Job DescriptionQ46839
Confidence1.95%DateThu Jan 5 12:35:04 GMT 2012
Rank89Aligned Residues35
% Identity6%Templated2fswa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain HxlR-like
Resolution2.16

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   85....90.........100.........110.........
Predicted Secondary structure 






Query SS confidence 


































Query Sequence  VAAVFLYKLTVASGQFDIIRSSVISITDDQRLQVL
Query Conservation    




     


   
   
  

 
 
 


Alig confidence 


































Template Conservation 
   

  
  
  

 

   
  

   

 

Template Sequence  WTLLIIFQINRRIIRYGELKRAIPGISEKXLIDEL
Template Known Secondary structure  STTS
STT

Template Predicted Secondary structure 










Template SS confidence 


































   23......30.........40.........50.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions