Return to main results Retrieve Phyre Job Id

Job DescriptionQ46839
Confidence18.32%DateThu Jan 5 12:35:04 GMT 2012
Rank3Aligned Residues30
% Identity17%Templated2axtk1
SCOP infoSingle transmembrane helix Photosystem II reaction center protein K, PsbK PsbK-like
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........
Predicted Secondary structure 






Query SS confidence 





























Query Sequence  PMGGLGLSALVALIPIIFFFVALAVLRLKG
Query Conservation 
 
   
  


 



   
 
   
  
Alig confidence 





























Template Conservation 



  
 






 

 










Template Sequence  PEAYAIFDPLVDVLPVIPVLFLALAFVWQA
Template Known Secondary structure 
GGGGG
GGG
Template Predicted Secondary structure 
Template SS confidence 





























   12.......20.........30.........40.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions