Job Description Q46839 Confidence 2.46% Date Thu Jan 5 12:35:04 GMT 2012 Rank 60 Aligned Residues 54 % Identity 13% Template c3a7kD_ PDB info PDB header:membrane protein Chain: D: PDB Molecule:halorhodopsin; PDBTitle: crystal structure of halorhodopsin from natronomonas2 pharaonis Resolution 2.00 Å

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		7	.	.	10	.			.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure							.	.																															.
Query SS confidence							.	.																															.
Query Sequence		M	Y	M	P	M	.	.	G	G	L	G	L	S	A	L	V	A	L	I	P	I	I	F	F	F	V	A	L	A	V	L	R	L	K	G	H	V	.	A	G	A	I	T	L	I	L	S	I	L	I	A	I	F	A	F	K	M
Query Conservation							.	.																															.
Alig confidence							.	.																															.
Template Conservation
Template Sequence		L	N	D	P	L	L	A	S	S	L	Y	I	N	I	A	L	A	G	L	S	I	L	L	F	V	F	M	T	R	G	L	D	D	P	R	A	K	L	I	A	V	S	T	I	L	V	P	V	V	S	I	A	S	Y	T	G	L
Template Known Secondary structure		S	S																										S	T	T
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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