Job Description Q46839 Confidence 2.90% Date Thu Jan 5 12:35:04 GMT 2012 Rank 43 Aligned Residues 118 % Identity 8% Template c2jlnA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:mhp1; PDBTitle: structure of mhp1, a nucleobase-cation-symport-1 family2 transporter Resolution 2.85 Å

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		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.												.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	A	L	G	V	P	I	L	V	A	G	Q	V	T	G	I	D	P	F	H	I	G	A	M	A	G	R	Q	L	P	F	L	S	V	L	V	P	F	W	L	V	.	A	M	M	D	G	W	K	G	V	K	E	T	.	.	.	.	.	.	.	.	.	.	.	W	P	A	A	L	V	A	G	G	S	F	A	V	T	Q
Query Conservation																																											.													.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	V	I	V	S	A	V	V	G	L	L	M	M	P	W	Q	F	A	G	V	L	N	T	F	L	N	L	L	A	S	A	L	G	P	L	A	G	I	M	I	S	D	Y	F	L	V	R	R	R	R	I	S	L	H	D	L	Y	R	T	K	G	I	Y	T	Y	W	R	G	V	N	W	V	A	L	A	V	Y	A	V	A
Template Known Secondary structure													T		G	G	G	T														T	T													T	T	S	T	T								T	B	S	S	S	T	T		T	B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	F	T	S	N	Y	I	G	P	E	L	P	D	I	T	S	A	L	V	S	I	V	S	L	A	L	F	L	K	V	W	R	P	K	N	T	E	T	A	I	S	M	G	Q	S	A	G	A	M	V	V
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		L	A	V	S	.	F	L	T	P	D	L	M	F	V	T	G	L	I	A	A	L	L	L	H	I	P	A	M	R	W	V	A	K	T	F	P	L	F	S	E	A	E	S	R	N	E	D	Y	L	R	P
Template Known Secondary structure						.		T		G	G	G																					T	T	T	S		S			G	G	G	G	G						S
Template Predicted Secondary structure						.
Template SS confidence
		419	420	.	.		.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions